Publications
2012
Gonzalez Besteiro M.A. & Ulm R.: ATR and MKP1 play distinct roles in response to UV-B stress in Arabidopsis.
Plant J 2012. PMID: 23237049.
de Respinis S., Tonolla M., Pranghofer S., Petrini L., Petrini O. & Bosshard P.P.: Identification of dermatophytes by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry.
Medical mycology : official publication of the International Society for Human and Animal Mycology 2012. PMID: 23228046.
Gonzalez Besteiro M.A. & Ulm R.: Phosphorylation and Stabilization of Arabidopsis MAP Kinase Phosphatase 1 in Response to UV-B Stress.
J Biol Chem 2012. PMID: 23188831.
Andres-Barrao C., Benagli C., Chappuis M., Ortega Perez R., Tonolla M. & Barja F.: Rapid identification of acetic acid bacteria using MALDI-TOF mass spectrometry fingerprinting.
Systematic and applied microbiology 2012. PMID: 23182036.
Lee K.P. & Lopez-Molina L.: Control of seed germination in the shade.
Cell Cycle 2012, 11(24). PMID: 23165205.
Rochaix J.D., Lemeille S., Shapiguzov A., Samol I., Fucile G., Willig A. & Goldschmidt-Clermont M.: Protein kinases and phosphatases involved in the acclimation of the photosynthetic apparatus to a changing light environment.
Philos Trans R Soc Lond B Biol Sci 2012, 367(1608):3466-3474. PMID: 23148273.
Paszkowski J. & Martienssen R.A.: Cell signaling and gene regulation.
Curr Opin Plant Biol 2012, 15(5):493-495. PMID: 23141671.
Coquille S., Roux C., Fitzpatrick T.B. & Thore S.: The last piece in the vitamin B1 biosynthesis puzzle: Structural and functional insight into yeast HMP-P synthase.
J Biol Chem 2012. PMID: 23048037.
Lee K.P., Piskurewicz U., Tureckova V., Carat S., Chappuis R., Strnad M., Fankhauser C. & Lopez-Molina L.: Spatially and genetically distinct control of seed germination by phytochromes A and B.
Genes Dev 2012, 26(17):1984-1996. PMID: 22948663.
Saad M.M., Crevecoeur M., Masson-Boivin C. & Perret X.: The type 3 protein secretion system of Cupriavidus taiwanensis strain LMG19424 compromises symbiosis with Leucaena leucocephala.
Appl Environ Microbiol 2012, 78(20):7476-7479. PMID: 22865066.
Rahire M., Laroche F., Cerutti L. & Rochaix J.D.: Identification of an OPR protein involved in the translation initiation of the PsaB subunit of photosystem I.
Plant J 2012, 72(4):652-661. PMID: 22817760.
Formighieri C., Ceol M., Bonente G., Rochaix J.D. & Bassi R.: Retrograde Signaling and Photoprotection in a gun4 Mutant of Chlamydomonas reinhardtii.
Molecular plant 2012, 5(6):1242-1262. PMID: 22767629.
Samol I., Shapiguzov A., Ingelsson B., Fucile G., Crevecoeur M., Vener A.V., Rochaix J.D. & Goldschmidt-Clermont M.: Identification of a photosystem II phosphatase involved in light acclimation in Arabidopsis.
Plant Cell 2012, 24(6):2596-2609. PMID: 22706287.
Dieppois G., Ducret V., Caille O. & Perron K.: The Transcriptional Regulator CzcR Modulates Antibiotic Resistance and Quorum Sensing in Pseudomonas aeruginosa.
PLoS One 2012, 7(5):e38148. PMID: 22666466.
Ziegler D., Mariotti A., Pfluger V., Saad M., Vogel G., Tonolla M. & Perret X.: In situ identification of plant-invasive bacteria with maldi-tof mass spectrometry.
PLoS One 2012, 7(5):e37189. PMID: 22615938.
Viczian A., Adam E., Wolf I., Bindics J., Kircher S., Heijde M., Ulm R., Schafer E. & Nagy F.: A short amino-terminal part of Arabidopsis phytochrome a induces constitutive photomorphogenic response.
Molecular plant 2012, 5(3):103-115. PMID: 22498774.
Mirouze M., Lieberman-Lazarovich M., Aversano R., Bucher E., Nicolet J., Reinders J. & Paszkowski J.: Loss of DNA methylation affects the recombination landscape in Arabidopsis.
Proc Natl Acad Sci U S A 2012, 109(15):5880-5885. PMID: 22451936.
Peduzzi S., Storelli N., Welsh A., Peduzzi R., Hahn D., Perret X. & Tonolla M.: Candidatus "Thiodictyon syntrophicum", sp. nov., a new purple sulfur bacterium isolated from the chemocline of Lake Cadagno forming aggregates and specific associations with Desulfocapsa sp.
Systematic and applied microbiology 2012, 35(3):139-144. PMID: 22386960.
Fitzpatrick T.B., Basset G.J., Borel P., Carrari F., Dellapenna D., Fraser P.D., Hellmann H., Osorio S., Rothan C., Valpuesta V., Caris-Veyrat C. & Fernie A.R.: Vitamin deficiencies in humans: can plant science help?
Plant Cell 2012, 24(2):395-414. PMID: 22374394.
Oukarroum A., Strasser R.J. & Schansker G.: Heat stress and the photosynthetic electron transport chain of the lichen Parmelina tiliacea (Hoffm.) Ach. in the dry and the wet state: differences and similarities with the heat stress response of higher plants.
Photosynth Res 2012, 111(3):303-314. PMID: 22373736.
Nishimura T., Molinard G., Petty T.J., Broger L., Gabus C., Halazonetis T.D., Thore S. & Paszkowski J.: Structural Basis of Transcriptional Gene Silencing Mediated by Arabidopsis MOM1.
PLoS Genet 2012, 8(2):e1002484. PMID: 22346760.
Heijde M. & Ulm R.: UV-B photoreceptor-mediated signalling in plants.
Trends Plant Sci 2012, 17(4):230-237. PMID: 22326562.
2011
Thevenon F., Regier N., Benagli C., Tonolla M., Adatte T., Wildi W. & Pote J.: Characterization of fecal indicator bacteria in sediments cores from the largest freshwater lake of Western Europe (Lake Geneva, Switzerland).
Ecotoxicol Environ Saf 2011. PMID: 22209635.
Andres-Barrao C., Saad M.M., Chappuis M.L., Boffa M., Perret X., Perez R.O. & Barja F.: Proteome analysis of Acetobacter pasteurianus during acetic acid fermentation.
J Proteomics 2011. PMID: 22155126.
Ceppi M.G., Oukarroum A., Cicek N., Strasser R.J. & Schansker G.: The IP amplitude of the fluorescence rise OJIP is sensitive to changes in the photosystem I content of leaves: a study on plants exposed to magnesium and sulfate deficiencies, drought stress and salt stress.
Physiol Plant 2011. PMID: 22121914.
Willig A., Shapiguzov A., Goldschmidt-Clermont M. & Rochaix J.D.: The Phosphorylation Status of the Chloroplast Protein Kinase STN7 of Arabidopsis Affects Its Turnover.
Plant Physiol 2011, 157(4):2102-2107. PMID: 21976483.
Stephan R., Cernela N., Ziegler D., Pfluger V., Tonolla M., Ravasi D., Fredriksson-Ahomaa M. & Hachler H.: Rapid species specific identification and subtyping of Yersinia enterocolitica by MALDI-TOF Mass spectrometry.
J Microbiol Methods 2011. PMID: 21914454.
Piskurewicz U. & Lopez-Molina L.: Isolation of genetic material from Arabidopsis seeds.
Methods Mol Biol 2011, 773:151-164. PMID: 21898255.
Gonzalez Besteiro M.A., Bartels S., Albert A. & Ulm R.: Arabidopsis MAP kinase phosphatase 1 and its target MAP kinases 3 and 6 antagonistically determine UV-B stress tolerance, independent of the UVR8 photoreceptor pathway.
Plant J 2011. PMID: 21790814.
Reiland S., Finazzi G., Endler A., Willig A., Baerenfaller K., Grossmann J., Gerrits B., Rutishauser D., Gruissem W., Rochaix J.D. & Baginsky S.: Comparative phosphoproteome profiling reveals a function of the STN8 kinase in fine-tuning of cyclic electron flow (CEF).
Proc Natl Acad Sci U S A 2011, 108(31):12955-12960. PMID: 21768351.
Fumeaux C., Bakkou N., Kopcinska J., Golinowski W., Westenberg D.J., Muller P. & Perret X.: Functional analysis of the nifQdctA1y4vGHIJ operon of Sinorhizobium fredii strain NGR234 using a transposon with a NifA-dependent read-out promoter.
Microbiology 2011. PMID: 21719545.
Ohno Y., Narangajavana J., Yamamoto A., Hattori T., Kagaya Y., Paszkowski J., Gruissem W., Hennig L. & Takeda S.: Ectopic Gene Expression and Organogenesis in Arabidopsis Mutants Missing BRU1 Required for Genome Maintenance.
Genetics 2011. PMID: 21705754.
Rochaix J.D.: Reprint of: Regulation of photosynthetic electron transport.
Biochim Biophys Acta 2011, 1807(8):878-886. PMID: 21605544.
Cotado-Sampayo M., Ortega Perez R., Ojha M., Seum C. & Barja F.: Characterization of Neurospora crassa alpha-actinin.
Curr Microbiol 2011, 63(1):100-105. PMID: 21598047.
Fankhauser C. & Ulm R.: Light-regulated interactions with SPA proteins underlie cryptochrome-mediated gene expression.
Genes Dev 2011, 25(10):1004-1009. PMID: 21576261.
Rizzini L., Favory J.J., Cloix C., Faggionato D., O'Hara A., Kaiserli E., Baumeister R., Schafer E., Nagy F., Jenkins G.I. & Ulm R.: Perception of UV-B by the Arabidopsis UVR8 protein.
Science 2011, 332(6025):103-106. PMID: 21454788.
Mirouze M. & Paszkowski J.: Epigenetic contribution to stress adaptation in plants.
Curr Opin Plant Biol 2011, 14(3):267-274. PMID: 21450514.
Anderson J.C., Bartels S., Besteiro M.A., Shahollari B., Ulm R. & Peck S.C.: Arabidopsis MAP Kinase Phosphatase 1 (AtMKP1) negatively regulates MPK6-mediated PAMP responses and resistance against bacteria.
Plant J 2011, 67(2):258-268. PMID: 21447069.
Andres-Barrao C., Falquet L., Calderon-Copete S.P., Descombes P., Ortega Perez R. & Barja F.: Genome sequences of the high-acetic acid-resistant bacteria Gluconacetobacter europaeus LMG 18890T and G. europaeus LMG 18494 (reference strains), G. europaeus 5P3, and Gluconacetobacter oboediens 174Bp2 (isolated from vinegar).
J Bacteriol 2011, 193(10):2670-2671. PMID: 21441523.
Day A. & Goldschmidt-Clermont M.: The chloroplast transformation toolbox: selectable markers and marker removal.
Plant Biotechnol J 2011, 9(5):540-553. PMID: 21426476.
Parent C., Crevecoeur M., Capelli N. & Dat J.F.: Contrasting growth and adaptive responses of two oak species to flooding stress: role of non-symbiotic haemoglobin.
Plant Cell Environ 2011, 34(7):1113-1126. PMID: 21410709.
Ito H., Gaubert H., Bucher E., Mirouze M., Vaillant I. & Paszkowski J.: An siRNA pathway prevents transgenerational retrotransposition in plants subjected to stress.
Nature 2011, 472(7341):115-119. PMID: 21399627.
Feher B., Kozma-Bognar L., Kevei E., Hajdu A., Binkert M., Davis S.J., Schafer E., Ulm R. & Nagy F.: Functional interaction of the circadian clock and UV RESISTANCE LOCUS 8-controlled UV-B signaling pathways in Arabidopsis thaliana.
Plant J 2011, 67(1):37-48. PMID: 21395889.
Paszkowski J. & Grossniklaus U.: Selected aspects of transgenerational epigenetic inheritance and resetting in plants.
Curr Opin Plant Biol 2011, 14(2):195-203. PMID: 21333585.
Moccand C., Kaufmann M. & Fitzpatrick T.B.: It takes two to tango: defining an essential second active site in pyridoxal 5'-phosphate synthase.
PLoS One 2011, 6(1):e16042. PMID: 21283685.
Raschke M., Boycheva S., Crevecoeur M., Nunes-Nesi A., Witt S., Fernie A.R., Amrhein N. & Fitzpatrick T.B.: Enhanced levels of vitamin B(6) increase aerial organ size and positively affect stress tolerance in Arabidopsis.
Plant J 2011, 66(3):414-432. PMID: 21241390.
Rochaix J.D.: Assembly of the photosynthetic apparatus.
Plant Physiol 2011, 155(4):1493-1500. PMID: 21239619.
Rochaix J.D.: Regulation of photosynthetic electron transport.
Biochim Biophys Acta 2011, 1807(3):375-383. PMID: 21118674.
Michelet L., Lefebvre-Legendre L., Burr S.E., Rochaix J.D. & Goldschmidt-Clermont M.: Enhanced chloroplast transgene expression in a nuclear mutant of Chlamydomonas.
Plant Biotechnol J 2011, 9(5):565-574. PMID: 20809927.
Années précédantes
Une liste des publications est maintenue par certains de nos laboratoires:
Groupe Goldschmidt et Rochaix
Groupe Jeanmonod (chaque chercheur séparément)
Unité de Microbiologie: Perret, Perron, Tonolla
Autres unités: Crèvecoeur, Degli Agosti