Publications
 

Cell signaling and gene regulation

Jerzy Paszkowski and Robert A Martienssen

Current OpinioninPlantBiology 2012, 15:1-3



Loss of DNA methylation affects the recombination landscape in Arabidopsis

Marie Mirouze, Michal Lieberman-Lazarovich, Riccardo Aversano, Etienne Bucher, Joël Nicolet, Jon Reinders

and Jerzy Paszkowski

Proc Natl Acad Sci U S A. 2012 Apr 10;109(15):5880-5



Structural Basis of Transcriptional Gene Silencing Mediated by Arabidopsis MOM1

Nishimura T, Molinard G, Petty TJ, Broger L, Gabus C, Halazonetis TD, Thore S, Paszkowski J

PLoS Genet. 2012 Feb;8(2):e1002484



Epigenetic contribution to stress adaptation in plants

Marie Mirouze and Jerzy Paszkowski

Current OpinioninPlantBiology 2011 Mar 28



An siRNA pathway prevents transgenerational retrotransposition in plants subjected to stress

Hidetaka Ito, Hervé Gaubert, Etienne Bucher, Marie Mirouze, Isabelle Vaillant & Jerzy Paszkowski

Nature(2011)doi:10.1038/nature09861



Selected aspects of transgenerational epigenetic inheritance and resetting in plants

Jerzy Paszkowski and Ueli Grossniklaus

Current OpinioninPlantBiology 2011, 14:1–9



Stress-induced activation of heterochromatic transcription

Tittel-Elmer M, Bucher E, Broger L, Mathieu O, Paszkowski J and Vaillant I

PLoS Genet. 2010 Oct 28;6(10):e1001175



Unlocking the Arabidopsis epigenome

Jon Reinders and Jerzy Paszkowski

Epigenetics. 2009 Nov 18;4(8)



MOM1 and Pol-IV/V interactions regulate the intensity and specificity of transcriptional gene silencing

Chotika Yokthongwattana, Etienne Bucher, Marian Čaikovski, Isabelle Vaillant, Joël Nicolet, Ortrun Mittelsten Scheid and Jerzy Paszkowski

EMBO J. (2009); doi:10.1038/emboj.2009.328



Selective epigenetic control of retrotransposition in Arabidopsis

Marie Mirouze, Jon Reinders, Etienne Bucher, Taisuke Nishimura, Korbinian Schneeberger, Stephan Ossowski, Jun Cao, Detlef Weigel, Jerzy Paszkowski & Olivier Mathieu

Nature (2009) vol. 461 (7262) pp. 427-30



Compromised stability of DNA methylation and transposon immobilization in mosaic Arabidopsis epigenomes.

J Reinders, B. B.H Wulff, M Mirouze, A Mari-Ordonez, M Dapp, W Rozhon, E Bucher, G Theiler, J Paszkowski

Genes & Development (2009) vol. 23 (8) pp. 939-950



Divergent evolution of CHD3 proteins resulted in MOM1 refining epigenetic control in vascular plants.
Marian Caikovski, Chotika Yokthongwattana, Yoshiki Habu, Taisuke Nishimura,
Olivier Mathieu and Jerzy Paszkowski

PLOS Genetics, 2008 Aug 22;4(8)



Genome-wide, high-resolution DNA methylation profiling using bisulfite-mediated cytosine conversion.

Reinders J, Delucinge Vivier C, Theiler G, Chollet D, Descombes P, Paszkowski J.

Genome Res. 2008 Mar;18(3):469-76. Epub 2008 Jan 24.



Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation.

Mathieu O, Reinders J, Caikovski M, Smathajitt C, Paszkowski J.

Cell. 2007 Sep 7;130(5):851-62




Role of histone and DNA methylation in gene regulation.

Vaillant I, Paszkowski J.

Curr Opin Plant Biol. 2007 Aug 8



Epigenetic transitions in plants not associated with changes in DNA or histone modification.

Nishimura T, Paszkowski J.

Biochim Biophys Acta. 2007 May-Jun;1769(5-6):393-8. Epub 2007 Mar 12



Epigenetic regulation of transcription in intermediate heterochromatin.
Habu Y, Mathieu O, Tariq M, Probst AV, Smathajitt C, Zhu T, Paszkowski J.

EMBO Rep. 2006 Dec;7(12):1279-84



DNA methylation and epigenetic inheritance during plant gametogenesis.

Takeda S, Paszkowski J.

Chromosoma. 2006 Feb;115(1):27-35. Epub 2005 Oct 26.



Distinct regulation of histone H3 methylation at lysines 27 and 9 by CpG methylation in Arabidopsis.
Mathieu O, Probst AV, Paszkowski J.
EMBO J. 2005 Aug 3;24(15):2783-91. Epub 2005 Jul 7.


  
Chromatin techniques for plant cells.
Bowler C, Benvenuto G, Laflamme P, Molino D, Probst AV, Tariq M, Paszkowski J.

Plant J. 2004 Sep;39(5):776-89.

 

 
DNA and histone methylation in plants.
Tariq M, Paszkowski J.

Trends Genet. 2004 Jun;20(6):244-51.



BRU1, a novel link between responses to DNA damage and epigenetic gene silencing in Arabidopsis.

Takeda S, Tadele Z, Hofmann I, Probst AV, Angelis KJ, Kaya H, Araki T, Mengiste T, Scheid OM, Shibahara K, Scheel D, Paszkowski J.

Genes Dev. 2004 Apr 1;18(7):782-93.


Erasure of CpG methylation in Arabidopsis alters patterns of histone H3 methylation in heterochromatin.

Tariq M, Saze H, Probst AV, Lichota J, Habu Y, Paszkowski J.

Proc Natl Acad Sci U S A. 2003 Jul 22;100(15):8823-7. Epub 2003 Jul 09. 


 
Formation of stable epialleles and their paramutation-like interaction in tetraploid Arabidopsis thaliana.
Mittelsten Scheid O, Afsar K, Paszkowski J.
Nat Genet. 2003 Aug;34(4):450-4.

 

Maintenance of CpG methylation is essential for epigenetic inheritance during plant gametogenesis.

Saze H, Scheid OM, Paszkowski J.

Nat Genet. 2003 May;34(1):65-9.



Plant genome modification by homologous recombination.
Hanin M, Paszkowski J.

Curr Opin Plant Biol. 2003 Apr;6(2):157-62.
 


Two means of transcriptional reactivation within heterochromatin.

Probst AV, Fransz PF, Paszkowski J, Scheid OM.

Plant J. 2003 Feb;33(4):743-9.

 

 
Distinct regulation of salinity and genotoxic stress responses by Arabidopsis MAP kinase phosphatase 1.
Ulm R, Ichimura K, Mizoguchi T, Peck SC, Zhu T, Wang X, Shinozaki K, Paszkowski J.
EMBO J. 2002 Dec 2;21(23):6483-93.

 
Two regulatory levels of transcriptional gene silencing in Arabidopsis.
Scheid OM, Probst AV, Afsar K, Paszkowski J.

Proc Natl Acad Sci U S A. 2002 Oct 15;99(21):13659-62. Epub 2002 Oct 07.


Depletion of MOM1 in non-dividing cells of Arabidopsis plants releases transcriptional gene silencing.
Tariq M, Habu Y, Paszkowski J.

EMBO Rep. 2002 Oct;3(10):951-5. Epub 2002 Sep 13.


Gene targeting in Arabidopsis.
Hanin M, Volrath S, Bogucki A, Briker M, Ward E, Paszkowski J.

Plant J. 2001 Dec;28(6):671-7.


 
Mitogen-activated protein kinase phosphatase is required for genotoxic stress relief in Arabidopsis.
Ulm R, Revenkova E, di Sansebastiano GP, Bechtold N, Paszkowski J.
Genes Dev. 2001 Mar 15;15(6):699-709.


Epigenetic developmental mechanisms in plants: molecules and targets of plant epigenetic regulation.
Habu Y, Kakutani T, Paszkowski J.

Curr Opin Genet Dev. 2001 Apr;11(2):215-20.



Gene silencing and DNA methylation processes.
Paszkowski J, Whitham SA.

Curr Opin Plant Biol. 2001 Apr;4(2):123-9.

 
Elevated levels of intrachromosomal homologous recombination in Arabidopsis overexpressing the MIM gene.
Hanin M, Mengiste T, Bogucki A, Paszkowski J.

Plant J. 2000 Oct;24(2):183-9.



Transcriptional gene silencing mutants.
Mittelsten Scheid O, Paszkowski J.

Plant Mol Biol. 2000 Jun;43(2-3):235-41.


Endogenous targets of transcriptional gene silencing in Arabidopsis.
Steimer A, Amedeo P, Afsar K, Fransz P, Scheid OM, Paszkowski J.

Plant Cell. 2000 Jul;12(7):1165-78.

 
Disruption of the plant gene MOM releases transcriptional silencing of methylated genes.
Amedeo P, Habu Y, Afsar K, Scheid OM, Paszkowski J.
Nature. 2000 May 11;405(6783):203-6.