Biological homochirality on earth and its tremendous consequences for pharmaceutical science and technology has led to an ever increasing interest in the selective production, the resolution and the detection of enantiomers of a chiral compound. Chiral surfaces and interfaces that can distinguish between enantiomers play a key role in this respect as enantioselective catalysts as well as for separation purposes. Despite the impressive progress in these areas in the last decade, molecular-level understanding of the interactions that are at the origin of enantiodiscrimination are lagging behind due to the lack of powerful experimental techniques to spot these interactions selectively with high sensitivity. In this article, techniques based on infrared spectroscopy are highlighted that are able to selectively target the chiral properties of interfaces. In particular, these methods are the combination of Attenuated Total Reflection InfraRed (ATR-IR) with Modulation Excitation Spectroscopy (MES) to probe enantiodiscriminating interactions at chiral solid–liquid interfaces and Vibrational Circular Dichroism (VCD), which is used to probe the structure of chirally-modified metal nanoparticles. The former technique aims at suppressing signals arising from non-selective interactions, which may completely hide the signals of interest due to enantiodiscriminating interactions. Recently, this method was successfully applied to investigate enantiodiscrimination at self-assembled monolayers of chiral thiols on gold surfaces. The nanometer size analogues of the latter—gold nanoparticles protected by a monolayer of a chiral thiol—are amenable to VCD spectroscopy. It is shown that this technique yields detailed structural information on the adsorption mode and the conformation of the adsorbed thiol. This may also turn out to be useful to clarify how chirality can be bestowed onto the metal core itself and the nature of the chirality of the latter, which is manifested in the metal-based circular dichroism activity of these nanoparticles.

Attenuated total reflection infrared (ATR-IR) spectroscopy in a flow-through cell was used to study the photocatalytic mineralization of malonic acid and succinic acid over P25 TiO₂ in situ. The experiments were performed in water at concentrations of 1.5×10⁻⁴ mol/L and pH 3.5 at room temperature. Changes on the catalyst surface were observed within a few minutes. The first step in the mineralization of malonic acid is a photo-Kolbe reaction of adsorbed malonate. Part of the resulting C₂ species is converted into oxalate and finally into carbon dioxide, and part desorbs from the surface. The branching ratio for the two pathways is 50:50. The mineralization reaction was also observed in the absence of dissolved oxygen, but at a slower rate. In the presence of dissolved ¹⁸O₂, labeled oxygen was incorporated into the adsorbed oxalate. A dominant pathway in the mineralization of succinic acid involves the transformation to oxalate via malonate. Thus, it is proposed that a favored pathway for dicarboxylic acid mineralization is a photo-Kolbe reaction, followed by oxidation of the carbon-centered radical to a carboxylate, which corresponds to the overall formal shortening of the alkyl chain by one CH₂ unit.

We introduce zipper assembly as a simple and general concept to create complex functional architectures on conducting surfaces. Rigid-rod π-stack architecture composed of p-oligophenyl rods and blue naphthalenediimide (NDI) stacks is selected as an example. First, short p-quaterphenyl initiators with four anionic NDIs are deposited on gold. Then, long p-octiphenyl propagators with eight cationic NDIs are added. The lower half of the propagator π-stacks with the initiator, whereas the upper half of the molecule remains free. These cationic sticky-ends zip up with anionic propagators to produce anionic sticky-ends, and so on. Zipper assembly on gold nanoparticles is demonstrated by the appearance of the absorption of face-to-face NDI π-stacks and the shift of the surface plasmon resonance band with increasing layer thickness. Complete inhibition by zipper capping demonstrates that zipper assembly affords complex architectures that are more ordered than those obtained by conventional layer-by-layer (LBL) approaches. Zipper assembly on gold electrodes produces increasing photocurrents with increasing number of zipped layers. The photocurrents obtained by this method are much higher than those obtained by conventional LBL controls; zipper termination by capping cleanly stops any increase in photocurrent.

Bis-iminophosphoranes containing various types of linkers between two R₃P=N moieties were electrochemically oxidized at controlled potential in situ in the electron spin resonance (ESR) cavity. For linkers constituted of phenylenes, conjugated phenylenes or merely a dicyanoethylenic bond, this oxidation led to well-resolved ESR spectra which were characterized by their g values and by their ¹H, ¹⁴N and ³¹P isotropic hyperfine constants. These coupling constants agree with those calculated by DFT for the corresponding cation radicals. Experimental and theoretical results clearly indicate that in these species the unpaired electron is mostly delocalized on the bridge and on the nitrogen atoms while the spin density on the phosphorus atoms is particularly small. Cyclic voltammetry and ESR spectra show that the nature of the bridge between the two iminophosphoranes considerably influences the oxidation potential of the compound as well as the stability of the radical cation. Information about the conformation of the precursor containing two Ph₃P=N moieties separated by a —C(CN)=C(CN)—group was obtained from its crystal structure.

Macrophage infectivity potentiator (MIP) was originally reported to be a chlamydial lipoprotein from experiments showing incorporation of radiolabeled palmitic acid into native and recombinant MIP; inhibition of posttranslational processing of recombinant MIP by globomycin, known to inhibit signal peptidase II; and solubility of native MIP in Triton X-114. However, the detailed structural characterization of the lipid moiety on MIP has never been fully elucidated. In this study, bioinformatics and mass spectrometry analysis, as well as radiolabeling and immunochemical experiments, were conducted to further characterize MIP structure and subcellular localization. In silico analysis showed that the amino acid sequence of MIP is conserved across chlamydial species. A potential signal sequence with a contained lipobox was identified, and a recombinant C20A variant was prepared by replacing the probable lipobox cysteine with an alanine. Both incorporation of U-¹⁴C-esterified glycerol and [U-¹⁴C]palmitic acid and posttranslational processing that was inhibitable by globomycin were observed for recombinant wild-type MIP but not for the recombinant C20A MIP variant. The fatty acid contents of native and recombinant MIP were analyzed by gas chromatography-mass spectrometry, and the presence of amide-linked fatty acids in recombinant MIP was investigated by alkaline methanolysis. These results demonstrated a lipid modification in MIP similar to that of other prokaryotic lipoproteins. In addition, MIP was detected in an outer membrane preparation of Chlamydia trachomatis elementary bodies and was shown to be present at the surfaces of elementary bodies by surface biotinylation and surface immunoprecipitation experiments.

A new barium silico-aluminate phase with the stoichiometry Ba13.35(1) Al30.7 Si5.3 O70 has been found and characterized. The compound crystallizes in the space group P63 /m (No. 176) with a = 15.1683(17) Å, c = 8.8708(6) Å, V = 1767.5(4) ų , Z = 1, Rw = 0.026, 32 refined parameters. A 3-dimensional matrix of Al/SiO4 tetrahedra with Ba(II) ions located in channels along the c axis builds up the structure. One of these channels is partially filled with Ba(II) ions (CN 6+3) in Wyckoff position 2a, leaving ∼ 1/3 of the positions empty. The second and third type of Ba(II) ions occupy channels orientated along the c axis with CN 4+2+2 and 4+3+1, respectively. The structure shows a rare clustered arrangement of six tetrahedra filled exclusively by Al(III) and therefore is an exception to Loewenstein’s rule. The other tetrahedral positions show an Al to Si ratio of ∼ 4 : 1. The Al/Si–O bond lengths in the tetrahedral Al/Si positions drawn vs. site occupation show linear behavior similar to the prediction by Vegard’s rule for solid solutions. After doping with Eu(II) the compound shows bright orange-yellow luminescence with an unusual large shift of the Eu(II) emission band.

The creation of long-lived charge-separated states in donor-acceptor assemblies has been the goal of many studies aimed at mimicking the primary processes in photosynthesis. Here we present such assemblies based on tetrathiafulvalene (TTF) as electron donor and a dipyridophenazine (dppz) unit as electron acceptor in the form of a fused ligand (TTF-dppz) coordinated to ruthenium(II) via the dipyrido coordination site and with 2,2′-bipyridine (bpy) as auxiliary ligand, namely [Ru(bpy)_3−x(TTF-dppz)_x]²⁺ (x = 1−3). For x = 2, irradiation into the metal to dppz charge transfer transition results in electron transfer from TTF to ruthenium, thus creating a charge-separated state best described by [(TTF⁺-dppz)Ru(dppz⁻-TTF)(bpy)]²⁺ with a lifetime of 2.5 μs in dichloromethane.

We discuss and illustrate by several examples how the ultrafast excited-state dynamics of a chromophore can be altered when changing its environment from a homogenous solution to a biological molecule such as proteins or nucleic acids.

A series of copper(I)−α-ketocarboxylate complexes have been prepared and shown to exhibit variable coordination modes of the α-ketocarboxylate ligand. Reaction with O₂ induces decarboxylation of this ligand, and the derived copper−oxygen intermediate(s) has been intercepted, resulting in hydroxylation of an arene substituent on the supporting N-donor ligand. Theoretical calculations have provided intriguing mechanistic notions for the process, notably implicating hydroxylation pathways that involve novel [Cu^I−OOC(O)R] and [Cu^II−O^-• ↔ Cu^III = O^2-]⁺ species.

Molecular dynamics simulations of Cm(III) in water were performed at two different temperatures, namely, T = 300 K and T = 473 K. Fully ab initio intermolecular potentials were employed. At the lower temperature, T = 300 K, nine water molecules coordinate preferentially the Cm(III) ion in the first coordination sphere, while at the higher temperature, T = 473 K, the preferential coordination number is eight instead of nine. The number of water molecules in the second coordination sphere is not uniquely defined, but the most probable number is 16.

The excited-state dynamics of the DNA intercalator YO-PRO-1 and of three derivatives has been investigated in water and in DNA using ultrafast fluorescence spectroscopy. In the free form, the singly charged dyes exist both as monomers and as H-dimers, while the doubly charged dyes exist predominantly as monomers. Both forms are very weakly fluorescent: the monomers because of ultrafast nonradiative deactivation, with a time constant on the order of 3−4 ps, associated with large amplitude motion around the methine bridge, and the H-dimers because of excitonic interaction. Upon intercalation into DNA, large amplitude motion is inhibited, H-dimers are disrupted, and the molecules become highly fluorescent. The early fluorescence dynamics of these dyes in DNA exhibits substantial differences compared with that measured with their homodimeric YOYO analogues, which are ascribed to dissimilarities in their local environment. Finally, the decay of the fluorescence polarization anisotropy reveals ultrafast hopping of the excitation energy between the intercalated dyes. In one case, a marked change of the depolarization dynamics upon increasing the dye concentration is observed and explained in terms of a different binding mode.

The topology of the ground-state potential energy surface of M(CN)₆ with orbitally degenerate ²T_2g (M = Ti^III (t_2g¹), Fe^III and Mn^II (both low-spin t_2g⁵)) and ³T_1g ground states (M = V^III (t_2g²), Mn^III and Cr^II (both low-spin t_2g⁴)) has been studied with linear and quadratic Jahn−Teller coupling models in the five-dimensional space of the ε_g and τ_2g octahedral vibrations (T_g⊗(ε_g+τ_2g) Jahn−Teller coupling problem (T_g = ²T_2g, ³T_1g)). A procedure is proposed to give access to all vibronic coupling parameters from geometry optimization with density functional theory (DFT) and the energies of a restricted number of Slater determinants, derived from electron replacements within the t_2g^1,5 or t_2g^2,4 ground-state electronic configurations. The results show that coupling to the τ_2g bending mode is dominant and leads to a stabilization of D_3d structures (absolute minima on the ground-state potential energy surface) for all complexes considered, except for [Ti(CN)₆]^3-, where the minimum is of D_4h symmetry. The Jahn−Teller stabilization energies for the D_3d minima are found to increase in the order of increasing CN−M π back-donation (Ti^III < V^III < Mn^III < Fe^III < Mn^II < Cr^II). With the angular overlap model and bonding parameters derived from angular distortions, which correspond to the stable D_3d minima, the effect of configuration interaction and spin−orbit coupling on the ground-state potential energy surface is explored. This approach is used to correlate Jahn−Teller distortion parameters with structures from X-ray diffraction data. Jahn−Teller coupling to trigonal modes is also used to reinterpret the anisotropy of magnetic susceptibilities and g tensors of [Fe(CN)₆]^3-, and the ³T_1g ground-state splitting of [Mn(CN)₆]^3-, deduced from near-IR spectra. The implications of the pseudo Jahn−Teller coupling due to t_2g−e_g orbital mixing via the trigonal modes (τ_2g) and the effect of the dynamic Jahn−Teller coupling on the magnetic susceptibilities and g tensors of [Fe(CN)₆]^3- are also addressed.

The spin transition of the [Co(terpy)₂]²⁺ complex (terpy = 2,2′:6′,2″-terpyridine) is analysed based on experimental data from optical spectroscopy and magnetic susceptibility measurements. The single crystal absorption spectrum of [Co(terpy)₂](ClO₄)₂ shows an asymmetric absorption band at 14 400 cm⁻¹ with an intensity typical for a spin-allowed d–d transition and a temperature behaviour typical for a thermal spin transition. The single crystal absorption spectra of suggest that in this compound, the complex is essentially in the high-spin state at all temperatures. However, the increase in intensity observed in the region of the low-spin MLCT transition with increasing temperature implies an unusual partial thermal population of the low-spin state of up to about 10% at room temperature. Finally, high-spin → low-spin relaxation curves following pulsed laser excitation for [Co(terpy)₂](ClO₄)₂ dispersed in KBr discs, and as a comparison for the closely related [Co(4-terpyridone)₂](ClO₄)₂ spin-crossover compound are given.

An unsymmetric, peripherally octasubstituted phthalocyanine (Pc) 1, which contains a combination of dipyrido[3,2-f:2‘,3‘-h] quinoxaline and 3,5-di-tert-butylphenoxy substituents, has been obtained via a statistical condensation reaction of two corresponding phthalonitriles. Synthetic procedures for the selective metalation of the macrocyclic cavity and the periphery of 1 were developed, leading to the preparation of the key precursor metallophthalocyanines 3−5 in good yields. Two different strategies were applied to the synthesis of compact dyads MPc−Ru(II) 6−8 (M = Mg(II), Co(II), Zn(II)). Intramolecular electronic interactions in these dyads were studied by absorption, emission, and transient absorption spectroscopy. Upon photoexcitation, these dyads exhibit efficient intramolecular energy transfer from the Ru(II) chromophore to the MPc moiety.

The vibrational spectra of UBz and ThBz have been measured in solid argon. Complementary quantum chemical calculations have allowed the assignments of the vibrational spectra. According to the calculations, AcBz are stable molecules, as well as other species like BzAcBz and BzAc₂Bz. Experimentally, there is no evidence for the sandwich compounds BzAcBz and BzAc₂Bz due to the limitations in the reagent concentrations.

Capacitively coupled contactless conductivity detection (C⁴D) is a new technique providing high sensitivity in capillary electrophoresis (CE) especially for small ions that can otherwise only be determined with indirect methods. In this work, direct determination and validation of valproic acid (VPA) in biological fluids was achieved using CE with C⁴D. VPA is of pharmacological interest because of its use in epilepsy and bipolar disorder. The running electrolyte solution used consisted of 10 mM 2-(N-morpholino)ethane sulfonic acid (MES)/dl-histidine (His) and 50 μM hexadecyltrimethylammonium bromide (HTAB) at pH 6.0. Caproic acid (CA) was selected as internal standard (IS). Analyses of VPA in serum, plasma and urine samples were performed in less than 3 min. The interference of the sample matrix was reduced by deproteinization of the sample with acetonitrile (ACN). The effect of the solvent type and ratio on interference was investigated. The limits of detection (LOD) and quantitation (LOQ) of VPA in plasma samples were determined as 24 and 80 ng/ml, respectively. The method is linear between the 2 and 150 μg/ml, covering well the therapeutic range of VPA (50–100 μg/ml).

Rearrangement of cholesta-2,4,6-triene in the presence of p-toluenesulfonic acid in acetic acid at 70 °C leads to 4-methyl-19-nor-cholesta-1,3,5(10)-triene and 1(10 → 6)-abeo-14β-cholesta-5,7,9(10)-triene in less than 2 h. Postulated mechanisms of formation of these products are supported by molecular mechanics calculations of the relative stabilities of reaction intermediates. The results suggest that Δ^5,7-sterols, the most common natural precursors of triunsaturated steroidal hydrocarbons in contemporary sediments, constitute another major source for monoaromatic A and B steroids in addition to Δ⁵-sterols.

Interaction energies for a representative sample of 39 intermolecular complexes are calculated using two computational approaches based on the subsystem formulation of density functional theory introduced by Cortona (Phys. Rev. B 44:8454, 1991), adopted for studies of intermolecular complexes (Wesolowski and Weber in Chem. Phys. Lett. 248:71, 1996). The energy components (exchange-correlation and non-additive kinetic) expressed as explicit density functionals are approximated by means of gradient-free- (local density approximation) of gradient-dependent- (generalized gradient approximation) approximations. The sample of the considered intermolecular complexes was used previously by Zhao and Truhlar to compare the interaction energies derived using various methods based on the Kohn-Sham equations with high-level quantum chemistry results considered as the reference. It stretches from rare gas dimers up to strong hydrogen bonds. Our results indicate that the subsystem-based methods provide an interesting alternative to that based on the Kohn-Sham equations. Local density approximation, which is the simplest approximation for the relevant density functionals and which does not rely on any empirical data, leads to a computational approach comparing favorably with more than twenty methods based on the Kohn-Sham equations including the ones, which use extensively empirical parameterizations. For various types of non-bonding interactions, the strengths and weaknesses of gradient-free and gradient-dependent approximations to exchange-correlation and non-additive kinetic energy density functionals are discussed in detail.

The influence of pressure on the structural and vibrational properties of a₂RuH₆has been investigated using periodic density functional theory calculations performed at the local density approximation (LDA) and generalized gradient approximation (GGA) levels. At ambient pressure, the calculated structure and vibrational frequencies are in satisfactory agreement with experimental data. The calculated em>P-Vcurves could be fitted with the Vinet equation of state, yielding em>B₀=67.6and em>B₀=58.5  GPaat the LDA and GGA levels, respectively, and em>B₀^′=4.0at both theoretical levels. The unit cell parameter is found to decrease faster with increasing pressure than the Ru–H bond length. The calculated pressure dependence of the vibrational frequencies agrees well with experiment for em>ν₅(T_2g)but not for em>ν₉(A_1g)

Unexpected structural complexity: Well-crystallized Mg(BH₄)₂ powder is obtained, allowing the structure to be determined from synchrotron X-ray and neutron diffraction data. Mg(BH₄)₂ is a novel and remarkably complex three-dimensional framework in which each Mg²⁺ ion (blue) is tetrahedrally coordinated by four [BH₄]^- tetrahedra (B red, H gray; see picture).

Three ruthenium(II) polypyridine complexes of general formula [Ru(bpy)_3-n(TTF-dppz)_n](PF₆)₂ (n=1-3, bpy=2,2'-bipyridine), with one, two or three redox-active TTF-dppz (4',5'-bis(propylthio)tetrathiafulvenyl[i]dipyrido[3,2-a:2',3'-c]phenazine) ligands, were synthesised and fully characterised. Their electrochemical and photophysical properties are reported together with those of the reference compounds [Ru(bpy)₃](PF₆)₂, [Ru(dppz)₃](PF₆)₂ and [Ru(bpy)₂(dppz)](PF₆)₂ and the free TTF-dppz ligand. All three complexes show intraligand charge-transfer (ILCT) fluorescence of the TTF-dppz ligand. Remarkably, the complex with n=1 exhibits luminescence from the Ru²⁺dppz metal-to-ligand charge-transfer (³MLCT) state, whereas for the other two complexes, a radiationless pathway via electron transfer from a second TTF-dppz ligand quenches the ³MLCT luminescence. The TTF fragments as electron donors thus induce a ligand-to-ligand charge-separated (LLCS) state of the form TTF-dppz^--Ru²⁺→ -dppz-TTF⁺. The lifetime of this LLCS state is approximately 2.3 μs, which is four orders of magnitude longer than that of 0.4 ns for the ILCT state, because recombination of charges on two different ligands is substantially slower.

The excited-state dynamics of oligomeric phenyleneethynylenes (OPEs) of various length and substitution has been investigated by femtosecond time-resolved spectroscopy. The fluorescence lifetime of the OPEs decreases with the number of phenyleneethynylene units up to about 9. This effect is due to an increase of the oscillator strength for the S₁–S₀ transition. Dynamic features occurring within a few tens of picoseconds and ascribed to structural relaxation directly after population of the S₁ state can be observed in non-viscous solvents. The effect of torsional disorder on the fluorescence intensity is shown to depend strongly on the nature of the substituent on the phenyl groups. All these effects are qualitatively discussed with a simple exciton model.

Design, synthesis and evaluation of advanced rigid-rod π-stack photosystems with asymmetric scaffolds are reported. The influence of push–pull rods on self-organization, photoinduced charge separation and photosynthetic activity is investigated and turns out to be surprisingly small overall.

The fluorescence enhancement mechanisms of a series of DNA stains of the oxazole yellow (YO) family have been investigated in detail using steady-state and ultrafast time-resolved fluorescence spectroscopy. The strong increase in the fluorescence quantum yield of these dyes upon DNA binding is shown to originate from the inhibition of two distinct processes: 1) isomerisation through large-amplitude motion that non-radiatively deactivates the excited state within a few picoseconds and 2) formation of weakly emitting H-dimers. As the H-dimers are not totally non-fluorescent, their formation is less efficient than isomerisation as a fluorescent contrast mechanism. The propensity of the dyes to form H-dimers and thus to reduce their fluorescence contrast upon DNA binding is shown to depend on several of their structural parameters, such as their monomeric (YO) or homodimeric (YOYO) nature, their substitution and their electric charge. Moreover, these parameters also have a substantial influence on the affinity of the dyes for DNA and on the ensuing sensitivity for DNA detection. The results give new insight into the development and optimisation of fluorescent DNA probes with the highest contrast.

The influence of solute−solvent interactions on the vibrational energy relaxation dynamics of perylene and substituted perylenes in the first singlet excited-state upon excitation with moderate (<0.4 eV) excess energy has been investigated by monitoring the early narrowing of their fluorescence spectrum. This narrowing was found to occur on timescales ranging from a few hundreds of femtoseconds to a few picoseconds. Other processes, such as a partial decay of the fluorescence anisotropy and the damping of a low-frequency oscillation due to the propagation of a vibrational wavepacket, were found to take place on a very similar time scale. No significant relationship between the strength of nonspecific solute−solvent interactions and the vibrational energy relaxation dynamics of the solutes could be evidenced. On the other hand, in alcohols the spectral narrowing is faster with a solute having H-bonding sites, indicating that this specific interaction tends to favor vibrational energy relaxation. No relationship between the dynamics of spectral narrowing and macroscopic solvent properties, such as the thermal diffusivity, could be found. On the other hand, a correlation between this narrowing dynamics and the number of low-frequency modes of the solvent molecules was evidenced. All these observations cannot be discussed with a model where vibrational energy relaxation occurs via two consecutive and dynamically well-separated steps, namely ultrafast intramolecular vibrational redistribution followed by slower vibrational cooling. On the contrary, the results indicate that both intra- and intermolecular vibrational energy redistribution processes are closely entangled and occur, at least partially, on similar timescales.

The synthesis and characterization of two ortho-dimethyltetrathiafulvalene (o-DMTTF)-based rigid dimers containing dimethylsilicon (Me₂Si) or dimethylgermanium (Me₂Ge) linkers are described. Single-crystal X-ray analysis reveals planar geometry for the central 1,4-disilicon or 1,4-digermanium six-membered rings. DFT calculations provide optimized conformations in agreement with the experimental ones, and also emphasize the role of the heteroatomic linkers in the conjugation between the two redox active units. Cyclic voltammetry measurements show sequential oxidation into radical cation, and then dication species. Solution EPR measurements on the radical-cation species indicate full delocalization of the unpaired electron over both electroactive TTF units, with an associated coupling of 0.42 G with twelve equivalent protons. DFT calculations afford fully planar geometry for the radical-cation species and confirm the experimental isotropic coupling constant. Single-crystal X-ray analyses of two charge-transfer compounds obtained upon chemical oxidation, formulated as [(Me₂Si)₂(o-DMTTF)₂]-1/2[TCNQ]·1/2[TCNQF₄] and [(Me₂Ge)₂(o-DMTTF)₂]·[TCNQ], demonstrate the occurrence of genuine mixed-valence radical-cation species, as well as a three-dimensional network of short S···S intermolecular contacts. Temperature-dependent conductivity measurements demonstrate semiconducting behavior for both charge-transfer compounds, with an increase of the absolute value of the conductivity upon applying external pressure. Band structure calculations reveal peculiar pseudo-two-dimensional electronic structures, also confirming electronic interactions through SiMe₂ and GeMe₂ bridges.

The emergence of a family of computational methods, known under the label ‘density functional theory∈dex theory! density functional ’ or ‘DFT’, revolutionalized the field of computer modelling of complex molecular systems. Many computational schemes belonging to the DFT family are currently in use. Some of them are designed to be universal (nonempirical) whereas other to treat specific systems and/or properties (empirical). This review starts with the introduction of the formal elements underlying all these methods: Hohenberg-Kohn theorems∈dex theorem! Hohenberg-Kohn , reference system∈dex reference system of noninteracting electrons∈dex reference system! noninteracting electrons , exchange-correlation energy∈dex energy functional! exchange-correlation functional∈dex functional , and the Kohn-Sham equations∈dex equation! Kohn-Sham . The main roads to approximate the exchange-correlation-energy functional based on: local density approximation∈dex approximation! local density (LDA), generalized gradient approximation∈dex approximation! generalized gradient (GGA), meta-GGA∈dex energy functional! exchange-correlation! meta-GGA , and adiabatic connection∈dex adiabatic connection formula (hybrid functionals∈dex energy functional! exchange-correlation! hybrid ), are outlined. The performance of these approximations in describing molecular properties of relevance to intermolecular interaction∈dex interactions! intermolecular s and their interactions with environment in condensed phase (ionization potential∈dex potential! ionization s, electron∈dex electron affinities∈dex electron! affinity , electric moments∈dex electric moment , polarizabilities∈dex polarizability ) is reviewed. Developments concerning new methods situated within the general Hohenberg-Kohn-Sham framework or closely related to it are overviewed in the last section

The subsystem formulation of density functional theory is used to obtain equilibrium geometries and interaction energies for a representative set of noncovalently bound intermolecular complexes. The results are compared with literature benchmark data. The range of applicability of two considered approximations to the exchange-correlation- and nonadditive kinetic energy components of the total energy is determined. Local density approximation, which does not involve any empirical parameters, leads to excellent intermolecular equilibrium distances for hydrogen-bonded complexes (maximal error 0.13 Å for NH₃−NH₃). It is a method of choice for a wide class of weak intermolecular complexes including also dipole-bound and the ones formed by rare gas atoms or saturated hydrocarbons. The range of applicability of the chosen generalized gradient approximation, which was shown in our previous works to lead to good interaction energies in such complexes, where π-electrons are involved in the interaction, remains limited to this group because it improves neither binding energies nor equilibrium geometries in the wide class of complexes for which local density approximation is adequate. An efficient energy minimization procedure, in which optimization of the geometry and the electron density of each subsystem is made simultaneously, is proposed and tested.

The excited-state dynamics of a series of electron donor−acceptor bridged systems (DABS) consisting of a boron−dipyrromethene chromophore covalently linked to a dinitro-substituted triptycene has been investigated using femtosecond time-resolved spectroscopy. The chromophores differ by the number of bromine atom substituents. The fluorescence lifetime of the DABS without any bromine atom is strongly reduced when going from toluene to polar solvents, this shortening being already present in chloroform. This effect is about 10 times weaker with a single bromine atom and negligible with two bromine atoms on the chromophore. The excited-state lifetime shortening is ascribed to a charge transfer from the excited chromophore to a nitrobenzene moiety, the driving force of this process depending on the number of bromine substituents. The occurrence of this process is further confirmed by the investigation of the excited-state dynamics of the chromophore alone in pure nitrobenzene. Surprisingly, no correlation between the charge separation time constant and the dielectric properties of the solvents could be observed. However, a good correlation between the charge separation time constant and the diffusional reorientation time of the chromophore alone, measured by fluorescence anisotropy, was found. Quantum chemistry calculations suggest that quasi-free rotation about the single bond linking the chromophore to the triptycene moiety permits a sufficient coupling of the donor and the acceptor to ensure efficient charge separation. The charge separation dynamics in these molecules is thus controlled by the reorientational motion of the donor relative to the acceptor.

[M(CO)₄PPh₃]^•− (M = Mo, W) were trapped at 77 K in X-irradiated single crystals of M(CO)₅PPh₃ and studied by EPR. Structures of [M(CO)₄PPh₃]^•− (M = Cr, Mo, W) were optimized by DFT; predicted g and ³¹P-hyperfine tensors agree with experiments for M = Mo, W. The anions adopt a slightly distorted pyramidal structure with PPh₃ in basal position and the spin mostly delocalized in a metal-d_z² orbital and carbon-p_z orbitals of carbonyls. The EPR tensors are slightly modified by annealing, they suggest that new constraints in the matrix distort the structure of [M(CO)₄PPh₃]^•− (M = Cr, Mo, W).

The incorporation of enantiopure 1-amino-2,3-propanediol as a subcomponent into a dicopper double helicate resulted in perfect chiral induction of the helicate's twist. DFT calculations allowed the determination of the helicity of the complex in solution. The same helical induction, in which S amines induced a Λ helical twist, was observed in the solid state by X-ray crystallography. Electronic structure calculations also revealed that the unusual deep green color of this class of complexes was due to a metal-to-ligand charge transfer excitation, in which the excited state possesses a valence delocalized Cu₂³⁺ core. The use of a racemic amine subcomponent resulted in the formation of a dynamic library of six diastereomeric pairs of enantiomers. Surprisingly, this library converted into a single pair of enantiomers during crystallization. We were able to observe this process reverse upon redissolution, as initial ligand exchange was followed by covalent imine metathesis.

We describe an advanced setup for time-resolved x-ray absorption fine structure (XAFS) Spectroscopy with picosecond temporal resolution. It combines an intense femtosecond laser source synchronized to the x-ray pulses delivered into the microXAS beamline of the Swiss Light Source (SLS). The setup is applied to measure the short-lived high-spin geometric structure of photoexcited aqueous Fe(bpy)₃ at room temperature.

To study the electronic interactions in donor-acceptor (D-A) ensembles, D and A fragments are coupled in a single molecule. Specifically, a tetrathiafulvalene (TTF)-fused dipyrido[3,2-a:2',3'-c]phenazine (dppz) compound having inherent redox centers has been synthesized and structurally characterized. Its electronic absorption, fluorescence emission, photoinduced intramolecular charge transfer, and electrochemical behavior have been investigated. The observed electronic properties are explained on the basis of density functional theory.

The fluorine superhyperfine (shf) tensor measured in aFCl:La²⁺has been found to be practically isotropic, a result which is certainly anomalous when compared to that for em>d⁹centers with one unpaired electron in a em>x²−y²orbital. This puzzling fact has been explored by means of density functional calculations. Obtained results confirm that in the em>C_4vequilibrium geometry the unpaired electron lies in a em>b₁(∼x²−y²)orbital which overlaps with the sorbitals of four ⁻ligands. For explaining the origin of the near isotropy, which is well reproduced by the present calculations, the simple em>D_4hand i>C_4vaF₄²⁻ F₄²⁻ and gF₄²⁻centers have also been investigated. Although the obtained results stress the high dependence of the isotropic shf constant i>A_son the metal-ligand distance i>R a near isotropy of the shf tensor is only reached for aF₄²⁻(but not for F₄²⁻ under i>C_4vsymmetry which corresponds to the actual symmetry of the a²⁺center in the BaFCl lattice. The origin of this peculiar situation is shown to come from the mixing between dand forbitals of a²⁺allowed in i>C_4vsymmetry thus stressing the role played by forbitals in bonding properties. Writing i>A_s=CR^−n_sit is shown that for the i>D_4haF₄²⁻and F₄²⁻complexes the exponent i>n_sis around 20, while it is only equal to 4 for gF₄²⁻ This huge difference is shown to stem from the quite distinct slope of the radial i>dwave function at the equilibrium distance for the two i>d¹centers and the i>d⁹gF₄²⁻unit. Finally, the present calculations strongly support that the intense band peaked at 7  890  cm⁻¹recorded in the optical absorption spectrum of aFCl:La²⁺is indeed a d→4ftransition.

Several monouranium and diuranium polyhydride molecules were investigated using quantum chemical methods. The infrared spectra of uranium and hydrogen reaction products in condensed neon and pure hydrogen were measured and compared with previous argon matrix frequencies. The calculated molecular structures and vibrational frequencies were used to identify the species present in the matrix. Major new absorptions were observed and compared with the previous argon matrix study. Spectroscopic evidence was obtained for the novel complex, UH₄(H₂)₆, which has potential interest as a metal hydride with a large number of hydrogen atoms bound to uranium. Our calculations show that the series of complexes UH₄(H₂)_1,2,4,6 are stable.

The opposite orientation of the ester spacers in the rodlike ligands L 4^C12 (benzimidazole-OOC-phenyl) and L 5^C12 (benzimidazole-COO-phenyl) drastically changes the electronic structure of the aromatic systems, without affecting their meridional tricoordination to trivalent lanthanides, Ln^III, and their thermotropic liquid crystalline (i.e., mesomorphic) behaviors. However, the rich mesomorphism exhibited by the complexes [Ln(L 4^C12)(NO₃)₃] (Ln=La-Lu) vanishes in [Ln(L 5^C12)(NO₃)₃], despite superimposable molecular structures and comparable photophysical properties. Density functional theory (DFT) and time-dependant DFT calculations performed in the gas phase show that the inversion of the ester spacers has considerable effects on the electronic structure and polarization of the aromatic groups along the strands, which control residual intermolecular interactions responsible for the formation of thermotropic liquid-crystalline phases. As a rule of thumb, an alternation of electron-poor and electron-rich aromatic rings favors intermolecular interactions between the rigid cores and consequently mesomorphism, a situation encountered for L 4^C12, L 5^C12, [Ln(L 4^C12)(NO₃)₃], but not for [Ln(L 5^C12)(NO₃)₃]. The intercalation of an additional electron-rich diphenol ring on going from [Ln(L 5^C12)(NO₃)₃] to [Ln(L 6^C12)(NO₃)₃] restores mesomorphism despite an unfavorable orientation of the ester spacers, in agreement with our simple predictive model.

We report an in-depth theoretical study of 4-styrylpyridine in its singlet S₀ ground state. The geometries and the relative stabilities of the trans and cis isomers were investigated within density functional theory (DFT) as well as within Hartree-Fock (HF), second-order Møller-Plesset (MP2), and coupled cluster (CC) theories. The DFT calculations were performed using the B3LYP and PBE functionals, with basis sets of different qualities, and gave results that are very consistent with each other. The molecular structure is thus predicted to be planar at the energy minimum, which is associated with the trans conformation, and to become markedly twisted at the minimum of higher energy, which is associated with the cis conformation. The results of the calculations performed with the post-HF methods approach those obtained with the DFT methods, provided that the level of treatment of the electronic correlation is high enough and that sufficiently flexible basis sets are used. Calculations carried out within DFT also allowed the determination of the geometry and the energy of the molecule at the biradicaloid transition state associated with the thermal cis ↔trans isomerization and at the transition states associated with the enantiomerization of the cis isomer and with the rotations of the pyridinyl and phenyl groups in the trans and cis isomers. Car-Parrinello molecular dynamics simulations were also performed at 50, 150, and 300 K using the PBE functional. The studies allowed us to evidence the highly flexible nature of the molecule in both conformations. In particular, the trans isomer was found to exist mainly in a nonplanar form at finite temperatures, while the rotation of the pyridinyl ring in the cis isomer was incidentally observed to take place within ≈1 ps during the simulation carried out at 150 K on this isomer.

The ground state properties and absorption spectra of N-benzylideneaniline (NBA) have been studied at the density functional (DFT) and at the time-dependent density functional (TD-DFT) level of the theory. The equilibrium geometries of the E and Z isomers in the ground state and their vibrational frequencies have been computed. Furthermore, the excitation energies of the lowest excited singlet and triplet states and the potential energy curves along the torsion and the inversion isomerization coordinates were evaluated. The results are discussed in light of the available experimental data.

We argue with Kryachko's criticism [Int J Quantum Chem 2005, 103, 818] of the original proof of the second Hohenberg-Kohn theorem. The Kato cusp condition can be used to refute a "to-be-refuted" statement as an alternative to the original proof by Hohenberg and Kohn applicable for Coulombic systems. Since alternative ways to prove falseness of the "to-be-refuted" statement in a reduction ad absurdum proof do not exclude each other, Kryachko's criticism is not justified.

The ground and excited electronic state properties of calicene (triapentafulvalene or 5-(cycloprop-2-en-1-ylidene)cyclopenta-1,3-diene) have been studied with a variety of density functional models (mPWPW91, PBE, TPSS, TPSh, B3LYP) and post-Hartree−Fock models based on single (MP2 and CCSD(T)) and multideterminantal (CASPT2) reference wave functions. All methods agree well on the properties of ground-state calicene, which is described as a conjugated double bond system with substantial zwitterionic character deriving from a charge-separated mesomer in which the three- and five-membered rings are both aromatic. Although the two rings are joined by a formal double bond, contributions from the aromatic mesomer reduce its bond order substantially. A rotational barrier of 40−41 kcal mol^-1 is predicted in the gas phase and solvation effects reduce the barrier to 37 and 33 kcal mol^-1 in benzene and water, respectively, because of increased zwitterionic character in the twisted transition-state structure. Multi-state CASPT2 (MS-CASPT2) is used to characterize the first few excited singlet and triplet states and indicates that the most important transition occurs at 4.93 eV (251 nm). A cis−trans photoisomerization about the inter-ring double bond is found to be inefficient.

Structural changes of the iron(II)-tris-bipyridine ([Fe^II(bpy)₃]²⁺) complex induced by ultrashort pulse excitation and population of its short-lived (≤0.6  ns) quintet high spin state have been detected by picosecond x-ray absorption spectroscopy. The structural relaxation from the high spin to the low spin state was followed over the entire lifetime of the excited state. A combined analysis of the x-ray-absorption near-edge structure and extended x-ray-absorption fine structure spectroscopy features delivers an Fe-N bond elongation of 0.2 Å in the quintet state compared to the singlet ground state.

We present novel insight on like-spin domains (LSD) in cooperative spin transition solids by following the photo-transformation and the subsequent relaxation of a [Fe(ptz)₆](BF₄)₂ single crystal in the vicinity of the light-induced instability. Self-organization under light is observed, accompanied by Barkhausen-like noise and jumps which reveal the presence of elastic interactions between LSDs. The light-induced phase separation process is discussed in terms of a dynamic potential providing spinodal instability in the corresponding temperature range. This useful concept is applicable to all types of switchable molecular solids.

Maxing out at six: The maximum bond order that can be achieved between two equal atoms in the periodic system is six. The picture shows the potential energy curves for the diatoms Cr₂, Mo₂, and W₂, where the latter two are sextuply bonded molecules (d=internuclear distance in atomic units).

Recent advances in computational actinide chemistry are reported in this tutorial review. Muticonfigurational quantum chemical methods have been employed to study the gas phase spectroscopy of small actinide molecules. Examples of actinide compounds studied in solution are also presented. Finally the multiple bond in the diuranium molecule and other diactinide compounds is described.

The endohedral fullerene CH₄@C₈₄ has been studied using density functional theory (DFT) and second-order Møller-Plesset perturbation theory (MP2). In addition to the structure with a C— bond of CH₄ in a tetrahedral pocket conformation, we find an alternative minimum, very close in energy (6.3-9.5 kJ/mol higher according to the level of theory), with the methane inverted, which we call the antipocket conformation. Computed IR spectra are reported for CH₄@C₈₄ and also for the reference system CH₄@C₆₀. The calculated vibrational levels, in a harmonic approximation, reveal close-lying translational, librational, and shell-vibrational modes. The results are also presented for the isoelectronic species NH₄⁺@C₆₀.

Single crystal dixanthinium tetrachlorozincate has been grown from dilute chloridric acid. Polarized Raman spectrum of the single crystalline sample, FT-Raman and FT-IR spectra of the polycrystalline samples have been examined and the bands assigned to the appropriate modes predicted by a factor group analysis for the space group Pmn2₁. The crystal structure has been confirmed by powder XRD measurements.

Mixed single PbFBr_1−xI_x crystals have been prepared. X-ray powder diffraction structure determinations show that all samples crystallize with the matlockite structure. However, the single crystal structure of PbFBr_0.5I_0.5 involves not only fractional occupation of one site corresponding to the stoichiometry, but also split positions of the Pb²⁺ ion. Raman spectra reveal the presence of new additional bands with respect to PbFBr and PbFI. DFT calculations of lattice vibrations for PbFI show good agreement with experimental spectra. The calculated phonon dispersion curve suggests that for the mixed crystals the centre of inversion is conserved locally. These combined results suggest the presence of domains with ordered F–Pb–Br–Br–Pb–F and F–Pb–I–I–Pb–F layers in the mixed crystals. Calculations on PbFBr_0.5I_0.5 show that this suggested structure is more stable than the structure consisting of the F–Pb–Br–I–Pb–F arrangement.

Whereas there are hundreds of known iron(II) spin-crossover compounds, only a handful of cobalt(II) spin-crossover compounds have been discovered to date, and hardly an in depth study on any of them exists. This review begins with an introduction into the theoretical aspects to be considered when discussing spin-crossover compounds in general and cobalt(II) systems in particular. It is followed by case studies on [Co(bpy)₃]²⁺ and [Co(terpy)₂]²⁺ (bpy = 2,2′-bipyridine, terpy = 2,2′:6′,2″-terpyridine) presenting and discussing results from magnetic susceptibility measurements, X-ray crystallography, optical spectroscopy, and EPR spectroscopy.