Softwares for Axio Scan.Z1




For a free copy of ZEN lite image processing software, click here: ZEN lite (Windows only).  The HCBI recommends frequent downloads of ZEN to ensure your software is up-to-date and compatible with files from our newest microscopes

Click here to download the ZEN Blue Image analysis guide.



For a free copy of Fiji (ImageJ) image processing software, click here: Fiji (Windows or Mac)

Click here to be redirected to the extensive Fiji online documentation
Click here for a link to the ImageJ 1 documentation


Axio Scan .CZI to .TIF converter

A .czi to .tif or .bigtif converter is now available, please contact us to get a copy. This converter only works for .czi files acquired on the Axio Scan using JPEGXR compression. Extensive documentation HERE.

 (source: Harvard Center for Biological Imaging)