Output

Outreach Events

12.11.2022 FAIR CHARM technology presented at Night of open Knowledge (Nook) in Lübeck see more
01.10.2022 FAIR CHARM project presented during the open door event "La Physique fait son show" in Geneva see more

Scientific Articles (acknowledging FAIR CHARM)

Kim, Doyoung, et al. "The Effect of a Lipid Surface Coating on the Permeation of Upconverting Nanoparticles through a 3D Human Lung Epithelial Model" Advanced Functional Materials (2023)(2023)
Markus, Andrea, et al. "Effect of tissue fixation on the optical properties of structural components assessed 
by non-linear microscopy imaging" Biomedical Optics Express 14(8)(2023)
Mund, Andreas, et al. "Deep Visual Proteomics defines single-cell identity and heterogeneity" Nature Biotechnology (2022)
Hollandi, Reka, et al. "Nucleus segmentation: towards automated solutions" Trends in Cell Biology (2022)
Hirling, Dominik, and Peter Horvath "Cell segmentation and representation with shape priors" Computational and Structural Biotechnology Journal 21 (2023)

Oral presentations (invited and contributed, acknowledging FAIR CHARM)

Alexandra Latshaw, S Karpf, N Glöckner Burmeister, L Dubreil, S Ghosh, R
Hollandi, J Pichon, I Leroux, A Henkel, V Lutz, J Jurkevicius, V Kilin, T Kutscher, A
Vogel, RA Huber, P Horvath, K Rouger, L Bonacina

Faster than Fluorescence: Harmonic Imaging of Stem Cells in Whole Blood at GHz
Pixel Rate

Progress in Biomedical Photonics 2023, December 15, 2023, Bern, Switzerland
S. Karpf, L. Dubreil, K. Rouger, L. Bonacina 

Invited talk: Deeper and faster: new tools for nonlinear bioimaging 

Photonica 2023, August 28 - September 1, 2023, Belgrade, Serbia
C. Stock

Kilohertz Multimodal SLIDE Imaging in the Visible

ECBO 2023, June 24-30, 2023, München, Germany
T. F. Kutscher

Kilohertz two-photon SLIDE microscopy using a newly developed 780nm excitation laser

ECBO 2023, June 24-30, 2023, München, Germany
S. Karpf

Ultra-short pulse modulation with electro-optic modulators

ECBO 2023, June 24-30, 2023, München, GermanyP. Vanden Berghe

Limited regeneration of the enteric nervous system under physiological circumstances

AGA Research Symposium, Digestive Disease Week, May 6th, 2023, Chicago, USA 
F. Ramos

Label-free imaging of heart tissue damage caused by SARS-CoV-2 infection in rhesus macaque

Focus on Microscopy 2023, April 2-5, 2023, Porto, Portugal
Z. Zhang, M. Alata, R. Ciarán Prior, P. Srinivasan, T. Martens, L. Van Den Bosch, P. Vanden Berghe

Rapid assessment of peripheral myelin degeneration by label-free third harmonic generation microscopy

Focus on Microscopy 2023, April 2-5, 2023, Porto, Portugal
EMIM 2023, Salzburg: Special conference FAIR CHARM session Advancing Multiphoton Microscopy for Deeper & Faster Bioimaging  see more

Luigi Bonacina University of Geneva
Introduction to the project & Advancing Multiphoton Microscopy for Bioimaging 

Lukas Kontenis, Danielius Samsonas, Mantvydas Mikulis, Mikas Urbšas, Justas Uža, Vytautas Sinkus, Jonas Berzinš, Karolis Neimontas Light Conversion
Development of a femtosecond 1.3 – 1.7 µm source for nonlinear microscopy

Fernanda Ramos-Gomes, Andrea Markus, Frauke Alves Max-Planck-Institute for Multidisciplinary Sciences, Translational Molecular Imaging
Non-linear multiphoton microscopy – Immuno-oncology applications
Milvia Alata, Zhiqing Zhang, Pieter Vanden Berghe KU Leuven
Selected multiharmonic imaging applications in the central and enteric nervous system

Laurence Dubreil, Ibrahim Hassani, Thibaut Larcher, Isabelle Leroux, Cindy Schléder, Mireille Ledevin, Antoine Hamel, Armelle Magot, Yann Péréon, Karl Rouger INRAE/Oniris
Key contribution of multi-harmonic imaging in the evaluation of regenerative medicine for muscle diseases

Sebastian Karpf  Universität zu Lübeck
Fast imaging of cells in whole blood

FAIR CHARM session guest:
Marloes Groot  VU, Sciences/Physics, Amsterdam, Netherlands
Translation of higher harmonic generation microscopy into the clinic for tumor tissue assessment
P. Vanden Berghe

Invited talk: The enteric nervous system: architecture and function in physiological and neurodegenerative conditions

Mind the gut - from diet to neurodegeneration symposium, March 20th, 2023, Hannover, Germany 
P. Vanden Berghe

Invited talk: Second Harmonic Generation and STED Microscopy to study microtubule dynamics and axonal transport

University of Würzburg, January 31st, 2023, Germany 
L. Dubreil

Tissue clearing combined with non-linear microscopy, a relevant approach to characterize the 3D fibrosis network in dystrophic heart.

Journée d’animation scientifique France Bio-imaging, December 12th, 2022, France
S. Karpf

Invited talk: Disruptive Photonic Technology Grant

IEEE Photonics Conference, 13-17 November, 2022, Vancouver, Canada
T. Pingel

FAIR CHARM - Faster and Deeper Imaging

Photonics21 Annual Meeting 2022, June 30 - July 1, 2022, Brussels, Belgium
P. Vanden Berghe

Invited talk: Non-linear optical imaging

Hasselt University, September 5th, 2022, Belgium 
P. Vanden Berghe

Invited talk: Imaging long distance neuronal connections with a novel dual microscopy setup

ICALM (Interuniversity course advanced light microscopy), Antwerp November 18th 2022, Belgium 
S. Karpf, L. Dubreil, K. Rouger, Y. Mugnier, L. Bonacina

Dielectric Nanoparticles: from Multiorder Nonlinear Mixing to in Flow Imaging at GHz Pixel Rate

Focus on Microscopy 2022, April 10-13, 2022, Porto, Portugal (online event)
S. Karpf, L. Dubreil, K. Rouger, Y. Mugnier, L. Bonacina

Invited talk: Dielectric Nanoparticles: from Multiorder Nonlinear Mixing to in Flow Imaging at GHz Pixel Rate

From Solid State to Biophysics X, June 11-18, 2022, Cavtat, Croatia