Projects
NEXI
Data management platform for multi-centric medical data.
Collaboration with the Rhumatology Division (HUG, Faculté de Médecine) to develop a platform for the submission, aggregation, validation and management of multi-centric data.
Collaboration started: July 2022
Contact: denis.mongin@unige.ch
IGE3 Genomics Platform Data Software
Maintenance of two application used for sequences and scheduling management
SciCoS teams maintains and extends the application currently use to manage, store, and make available the sequences.
Collaboration started: July 2022
Partner web site: https://www.unige.ch/medecine/rgt/accueil/
Contact: Mylene.Docquier@unige.ch
«REGISTRE GENEVOIS DES TUMEURS» MAPPING
Mapping the data of the RGT to the standards of European Health Data & Evidence Network (EHDEN)
Collaboration with the RGT (Faculté de Médecine) funded by the EHDEN. Existing DATA is mapped to the existing ontolgies and properly documented in order to support multi-centric quantitative research.
Collaboration started: January 2022
Partner web site: https://www.unige.ch/medecine/rgt/accueil/
Contact: Evelyne.Fournier@unige.ch
HPC Teaching AT HEPIA
HPC course for HES bachelor students.
Teaching parallel progamming (MPI, OpenMP), GPU programming, and cluster usage for hepia bachelor students.
Collaboration started: September 2021
Partner web site: https://www.hesge.ch/hepia/bachelor/informatique-et-systemes-communication
Contact: paul.albuquerque@hesge.ch
Swissdatacube
Earth Observation for monitoring the environment of Switzerland in space and time.
Collaboration with UN Environment/GRID-Geneva and the University of Geneva, Institute for Environemental Sciences. Currently adapting the Datacube software to perform analysis of data on the Unige clusters: Baobab and Yggdrasil.
Collaboration started: March 2021
Project web site: https://www.swissdatacube.org/
Contact: Gregory Giuliani (Unige/IES)
COVIDATA
Data processing for COVID-19 management in Geneva.
Collaboration with the State of Geneva (Service de la Médecin Cantonale) and the Geneva Hospital. Software developement and operational support for the aquisition, management and analysis of COVID-19 data.
Project web site: State of Geneva / Data visualisation
Collaboration started: March 2021
Contact: Delphine Courvoisier (HUG), Simon Regard (SMC)
FONDUE
FOrmes Numérisées et Détection Unifiée des Écritures
Interdisciplinary DIgital Humanities collaboration. Implementation of a pipeline for massive Handwritten Text Recognition (HTR) on the University HPC infrastructure.
Collaboration started: March 2021
Contact: Simon Gabay (Unige/Digital Humanities)