Image and Data analysis
In order to facilitate the data storage and analysis to all users, ACCESS Geneva has developed a fully integrated data management system, based on Molecular Devices™ software environment. All data generated are automatically saved on our secured academic server and are easily accessible at any time with no risk of data or metadata loss. Thanks to the installation of dedicated virtual machines, any user can access his data at any time using a direct or VPN connection to the University of Geneva network.
In Carta™: In Carta is our latest AI based image anaylsis sofware. It allow us to segment particularly complex objects from 2D/3D images. Then the extraction of very deep image features (like texture parameters), will allow the AI based machine learning tool : Phenoglyph™, to perform phenotypic classification and quantification. In Carta will also be very porwerfull to analyse non-stained images (trabsmitted light images), which are very often difficult to segment efficiently.
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You can use MetaXpress™ on our workstation or on our Virtual Machine. |
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You can use AcuityXpress™ on our workstation or on our Virtual Machine. |
MetaXpress™: We offer MetaXpress™ Custom Module Editor, a deep image analysis tool, available on the virtual machine. The latest version of MetaXpress analysis software allow the user to develop very complex analysis pipeline. By implementing several segmentation steps, users can fully dissect any image. More than fifty parameters can then be extracted for each mask in each detection channel, which represents more than 200 data points per cell. Overall, this provides a precise phenotypic description of the image. The intensive analysis job is then sent to our calculation server, equipped with PowerCore®, which is able to provide multi-thread processing. 
