Publications

2019

  • Fang, Xiaona; Kruse, Karsten; Lu, Ting; Wang, Jin (2019) Nonequilibrium physics in biology. Rev. Mod. Phys. 91 (4) 045004.
  • Leuba, Florence; Soldati, Thierry (2019) RB155, RB156 and RB189 antibodies do not recognize the D. discoideum Tsg101 protein by western blot. Antib. Rep. 2 (4) e109.
  • Líndez, Adrià-Arnau Martí; Dunand-Sauthier, Isabelle; Conti, Mark; Gobet, Florian; Núñez, Nicolás; Hannich, J. Thomas; Riezman, Howard; Geiger, Roger; Piersigilli, Alessandra; Hahn, Kerstin; Lemeille, Sylvain; Becher, Burkhard; De Smedt, Thibaut; Hugues, Stéphanie; Reith, Walter (2019) Mitochondrial arginase-2 is a cell?autonomous regulator of CD8+ T cell function and antitumor efficacy. JCI Insight 4 (24) e132975.
  • Soldati, Thierry; Cardenal-Muñoz, Elena (2019) A brief historical and evolutionary perspective on the origin of cellular microbiology research. Cell. Microbiol. 21 (11) e13083.
  • Haribowo, A. Galih; Hannich, J. Thomas; Michel, Agnès H.; Megyeri, Márton; Schuldiner, Maya; Kornmann, Benoît; Riezman, Howard; Parton, Robert G. (2019) Cytotoxicity of 1-deoxysphingolipid unraveled by genome-wide genetic screens and lipidomics in Saccharomyces cerevisiae. Mol. Biol. Cell 30 (22) 2814-2826.
  • Aguilar-Hidalgo, Daniel; Hadjivasilou, Zena; Romanova-Michaelides, Maria; Gonzalez-Gaitan, Marcos; Juelicher, Frank (2019) Dynamic modes of morphogen transport. arXiv.org, e-Print Archive, Physics , arXiv:1909.13280.
  • Chang, Dalu; Lindberg, Eric; Feng, Suihan; Angerani, Simona; Riezman, Howard; Winssinger, Nicolas (2019) Luciferase-Induced Photouncaging: Bioluminolysis. Angew. Chem. Int. Ed. 58 (45) 16033-16037.
  • Soldati, Thierry (2019) Editorial: Cellular Microbiology 1999–2019. Cell. Microbiol. 21 (10) e13106.
  • Manenschijn, Hetty E.; Picco, Andrea; Mund, Markus; Rivier-Cordey, Anne-Sophie; Ries, Jonas; Kaksonen, Marko (2019) Type-I myosins promote actin polymerization to drive membrane bending in endocytosis. eLife 8 e44215.
  • Wasnik, Vaibhav H.; Lipp, Peter; Kruse, Karsten (2019) Positional Information Readout in Ca2+ Signaling. Phys. Rev. Lett. 123 (5) 058102.
  • Wasnik, Vaibhav H.; Lipp, Peter; Kruse, Karsten (2019) Accuracy of position determination in Ca2+ signaling. Phys. Rev. E 100 (2) 022401.
  • Faelber, Katja; Dietrich, Lea; Noel, Jeffrey K.; Wollweber, Florian; Pfitzner, Anna-Katharina; Mühleip, Alexander; Sánchez, Ricardo; Kudryashev, Misha; Chiaruttini, Nicolas; Lilie, Hauke; Schlegel, Jeanette; Rosenbaum, Eva; Hessenberger, Manuel; Matthaeus, Claudia; Kunz, Séverine; von der Malsburg, Alexander; Noé, Frank; Roux, Aurélien; van der Laan, Martin; Kühlbrandt, Werner; Daumke, Oliver (2019) Structure and assembly of the mitochondrial membrane remodelling GTPase Mgm1. Nature 571 (7765) 429-433.
  • Levernier, Nicolas; Dolgushev, Maxim; Bénichou, Olivier; Voituriez, Raphaël; Guérin, Thomas (2019) Survival probability of stochastic processes beyond persistence exponents. Nat. Commun. 10 2990.
  • Luscher, Alexandre; Fröhlich, Florian; Barisch, Caroline; Littlewood, Clare; Metcalfe, Joe; Leuba, Florence; Palma, Anita; Pirruccello, Michelle; Cesareni, Gianni; Stagi, Massimiliano; Walther, Tobias C.; Soldati, Thierry; De Camilli, Pietro; Swan, Laura E. (2019) Lowe Syndrome-linked endocytic adaptors direct membrane cycling kinetics with OCRL in Dictyostelium discoideum. Mol. Biol. Cell 30 (17) 2268-2282.
  • Kadosh, Avihay; Colom, Adai; Yellin, Ben; Roux, Aurélien; Shemesh, Tom (2019) The tilted helix model of dynamin oligomers. Proc. Natl. Acad. Sci. USA 116 (26) 12845-12850.
  • Jiménez-Rojo, Noemi; Riezman, Howard (2019) On the road to unraveling the molecular functions of ether lipids. FEBS Lett. 593 (17) 2378-2389.
  • Megyeri, Márton; Prasad, Rupali; Volpert, Giora; Sliwa-Gonzalez, Andrzej; Galih, Augustinus; Aguilera-Romero, Auxiliadora; Riezman, Howard; Barral, Yves; Futerman, Anthony H.; Schuldiner, Maya (2019) Yeast ceramide synthases, Lag1 and Lac1, have distinct substrate specificity. J. Cell. Sci. 132 jcs228411.
  • Schaedel, Laura; Triclin, Sarah; Chrétien, Denis; Abrieu, Ariane; Aumeier, Charlotte; Gaillard, Jérémie; Blanchoin, Laurent; Théry, Manuel; John, Karin (2019) Lattice defects induce microtubule self-renewal. Nat. Phys. 15 830-838.
  • Tomba, Caterina; Petithory, Tatiana; Pedron, Riccardo; Airoudj, Aissam; Di Meglio, Ilaria; Roux, Aurélien; Luchnikov, Valeriy (2019) [Inside Back Cover] Cells at Wrinkled Interfaces: LaserAssisted Strain Engineering of Thin Elastomer Films to Form Variable Wavy Substrates for Cell Culture (Small 21/2019). Small 15 (21) 1970113.
  • Riggi, Margot; Bourgoint, Clélia; Macchione, Mariano; Matile, Stefan; Loewith, Robbie; Roux, Aurélien (2019) TORC2 Controls Endocytosis Through Plasma Membrane Tension. J. Cell Biol. 218 (7) 2265.
  • Folz, Frederic; Wettmann, Lukas; Morigi, Giovanna; Kruse, Karsten (2019) Sound of an axon's growth. Phys. Rev. E 99 050401(R).
  • Morstein, Johannes; Hill, Rose Z.; Novak, Alexander J. E.; Feng, Suihan; Norman, Derek D.; Donthamsetti, Prashant C.; Frank, James A.; Harayama, Takeshi; Williams, Benjamin M.; Parrill, Abby L.; Tigyi, Gabor J.; Riezman, Howard; Isacoff, Ehud Y.; Bautista, Diana M.; Trauner, Dirk (2019) Optical control of sphingosine-1-phosphate formation and function. Nat. Chem. Biol. 15 623-631.
  • Ilmjärv, Sten; Augsburger, Fiona; Bolleman, Jerven Tjalling; Liechti, Robin; Bridge, Alan James; Sandström, Jenny; Jaquet, Vincent; Xenarios, Ioannis; Krause, Karl-Heinz (2019) Navigating in vitro bioactivity data by investigating available resources using model compounds. Sci. Data 6 (1) D1202.
  • Tomba, Caterina; Petithory, Tatiana; Pedron, Riccardo; Airoudj, Aissam; Di Meglio, Ilaria; Roux, Aurélien; Luchnikov, Valeriy (2019) Laser–Assisted Strain Engineering of Thin Elastomer Films to Form Variable Wavy Substrates for Cell Culture. Small 15 (21) 1900162.
  • Diop, El Hadji Assane; Queiroz, Emerson Ferreira; Marcourt, Laurence; Kicka, Sébastien; Rudaz, Serge; Diop, Tahir; Soldati, Thierry; Wolfender, Jean-Luc (2019) Antimycobacterial activity in a single-cell infection assay of ellagitannins from Combretum aculeatum and their bioavailable metabolites. J. Ethnopharmacol. 238 111832.
  • Thewes, Sascha; Soldati, Thierry; Eichinger, Ludwig (2019) Editorial: Amoebae as Host Models to Study the Interaction With Pathogens. Front. Cell. Infect. Microbiol. 9 47.
  • Loewith, Robbie; Riezman, Howard; Winssinger, Nicolas (2019) Sphingolipids and membrane targets for therapeutics. Curr. Opin. Chem. Biol. 50 19-28.
  • Bartolami, Eline; Basagiannis, Dimitris; Zong, Lili; Martinent, Rémi; Okamoto, Yasunori; Laurent, Quentin; Ward, Thomas R.; Gonzalez-Gaitan, Marcos; Sakai, Naomi; Matile, Stefan (2019) Diselenolane-Mediated Cellular Uptake:  Efficient Cytosolic Delivery of Probes, Peptides, Proteins, Artificial Metalloenzymes and Protein-Coated Quantum Dots. Chem. Eur. J. 25 (16) 4047-4051.
  • Klinkert, Kerstin; Levernier, Nicolas; Gross, Peter; Gentili, Christian; von Tobel, Lukas; Pierron, Marie; Busso, Coralie; Herrman, Sarah; Grill, Stephan W.; Kruse, Karsten; Gönczy, Pierre (2019) Aurora A depletion reveals centrosome-independent polarization mechanism in Caenorhabditis elegans. eLife 8 e44552.
  • Klinkert, Kerstin; Levernier,, Nicolas; Gross, Peter; Gentili, Christian; von Tobel, Lukas; Pierron, Marie; Busso, Coralie; Herrman, Sarah; Grill, Stephan W.; Kruse, Karsten; G (2019) Aurora A depletion reveals centrosome-independent polarization mechanism in Caenorhabditis elegans. eLife 8 e44552.
  • Goujon, Antoine; Colom, Adai; Straková, Karolína; Mercier, Vincent; Mahecic, Dora; Manley, Suliana; Sakai, Naomi; Roux, Aurélien; Matile, Stefan (2019) Mechanosensitive Fluorescent Probes to Image Membrane Tension in Mitochondria, Endoplasmic Reticulum and Lysosome. J. Am. Chem. Soc. 141 (8) 3380-3384.
  • Buckley, Catherine M.; Heath, Victoria L.; Gueho, Aurelie; Bosmani, Cristina; Knobloch, Paulina; Sikakana, Phumzile; Personnic, Nicolas; Dove, Stephen K.; Michell, Robert H.; Meier, Roger; Hilbi, Hubert; Soldati, Thierry; Insall, Robert H.; King, Jason (2019) PIKfyve/Fab1 is required for efficient V-ATPase and hydrolase delivery to phagosomes, phagosomal killing, and restriction of Legionella infection. PLoS Pathog. 15 (2) e1007551.
  • Levernier, Nicolas; Kruse, Karsten (2019) Spontaneous formation of chaotic protrusions in a polymerizing active gel layer. arXiv.org, e-Print Arch., Phys. , arXiv:1901.08332v2.
  • Koliwer-Brandl, Hendrik; Knobloch, Paulina; Barisch, Caroline; Welin, Amanda; Hanna, Nabil; Soldati, Thierry; Hilbi, Hubert (2019) Distinct Mycobacterium marinum phosphatases determine pathogen vacuole phosphoinositide pattern, phagosome maturation and escape to the cytosol. Cell. Microbiol. 21 (6) e13008.
  • Kardash, Elena; Nguyen, Hanh; Behrndt, Martin; Heisenberg, Carl-Philipp; Peyriéras, Nadine; Gonzalez-Gaitan, Marcos (2019) A contractile acto-myosin belt promotes growth anisotropy during the early stages of pectoral fin development in zebrafish. bioRxiv 10.1101/512038.
  • Machado, Sarah; Mercier, Vincent; Chiaruttini, Nicolas (2019) LimeSeg: a coarse-grained lipid membrane simulation for 3D image segmentation. BMC Bioinf. 20 (1) 2.
  • Feng, Suihan; Harayama, Takeshi; Chang, Dalu; Hannich, J. Thomas; Winssinger, Nicolas; Riezman, Howard (2019) Lysosome-targeted photoactivation reveals local sphingosine metabolism signatures. Chem. Sci. 10 (8) 2253-2258.
  • Maechler, Florian A.; Allier, Cédric; Roux, Aurélien; Tomba, Caterina (2019) Curvature Dependent constraints drive remodeling of epithelia. J. Cell Sci. 132 (4) jcs222372.
  • Sundukova, Mayya; Prifti, Efthymia; Bucci, Annalisa; Kirillova, Kseniia; Serrao, Joana; Reymond, Luc; Umebayashi, Miwa; Hovius, Ruud; Riezman, Howard; Johnsson, Kai; Heppenstall, Paul A. (2019) A Chemogenetic Approach for the Optical Monitoring of Voltage in Neurons. Angew. Chem. Int. Ed. 58 (8) 2341-2344.
  • Lombardot, Thierry; Morgat, Anne; Axelsen, Kristian B; Aimo, Lucila; Hyka-Nouspikel, Nevila; Niknejad, Anne; Ignatchenko, Alex; Xenarios, Ioannis; Coudert, Elisabeth; Redaschi, Nicole; Bridge, Alan (2019) Updates in Rhea: SPARQLing biochemical reaction data. Nucleic Acids Res. 47 (D1) D596-D600.
  • Carlini, Lina; Mahecic, Dora; Kleele, Tatjana; Roux, Aurelien; Manley, Suliana (2019) Membrane bending energy and tension govern mitochondrial division. bioRxiv, Biophys. preprint 10.1101/255356 .