Selected Publications

Bo Shan, Clive S Barker, Mengle Shao, Qianbin Zhang, Rana K Gupta, Yibo Wu. Multilayer-omics reveal sex- and depot-dependent adipose progenitor cell heterogeneity. Cell Metabolism. 2022 May 3;34(5):783-799.e7. doi: 10.1016/j.cmet.2022.03.012.  

Evan Williams*, Yibo Wu*, Pooja Jha, Sebastien Dubuis, Tiffany Amariuta, Witold Wolski, Nicola Zamboni, Ruedi Aebersold, Johan Auwerx. Systems proteomics of liver mitochondria function. Science. 2016 Jun 10;352(6291):aad0189. (*Co-first author)

Yibo Wu*, Evan Williams*, Sébastien Dubuis, Adrienne Mottis, Virginija Jovaisaite, Sander M. Houten, Carmen A. Argmann, Pouya Faridi, Witold Wolski, Zoltan Kutalik, Nicola Zamboni, Johan Auwerx, Ruedi Aebersold. Multilayered genetic and omics dissection of mitochondrial activity in a mouse reference population. Cell. 2014 Sep 11;158(6).

Evan Williams*, Yibo Wu*, Wolski W, Kim JY, Lan J, Hasan M, Halter C, Jha P, Ryu D, Auwerx J, Aebersold R. Quantifying and Localizing the Mitochondrial Proteome Across Five Tissues in A Mouse Population. Mol Cell Proteomics. 2018 Sep;17(9):1766-1777.

Yibo Wu*, Evan Williams*, Ruedi Aebersold. Application of SWATH Proteomics to Mouse Biology. Curr Protoc Mouse Biol. 2017 Jun 19;7(2):130-143.

Camille Terfve*, Eduard Sabidó*, Yibo Wu*, et al. System-Wide Quantitative Proteomics of the Metabolic Syndrome in Mice: Genotypic and Dietary Effects. J Proteome Res. 2017 Feb 3;16(2):831-841.

Yibo Wu, Jie Dai, Xinglin Yang, Sujun Li, Shilin Zhao, Jiashu Tang, Guangyong Zheng, Yixue Li, Jiarui Wu, Rong Zeng. Concurrent quantification of proteome and phosphoproteome to reveal system-wide association of protein phosphorylation and gene expression. Mol Cell Proteomics. 2009 Dec; 8(12):2809-26.

Baihao Zhang, Alexis Vogelzang, Michio Miyajima, Yuki Sugiura, Yibo Wu, et al. B cell-derived GABA elicits IL-10+ macrophages and limits anti-tumor immunity. Nature. 2021. Nov;599(7885):471-476.

Mengle Shao, Chelsea Hepler, Qianbin Zhang, Bo Shan, Lavanya Vishvanath, Gervaise H. Henry, Shangang Zhao, Yu. A. An, Yibo Wu, Douglas W. Strand, and Rana K. Gupta. Pathologic HIF1α signaling drives adipose progenitor dysfunction in obesity. Cell Stem Cell. 2021. Apr 1;28(4):685-701.e7.

Hongbo Zhang, Dongryeol Ryu, Yibo Wu, et al. NAD+ repletion improves mitochondrial and stem cell function and enhances life span in mice. Science. 2016 Jun 17;352(6292).