Publications

2008

  1. Kaksonen, Marko (2008) Taking apart the endocytic machinery. J. Cell Biol. 180 (6) 1059-1060.
  2. Watanabe, Reika; Castillon, Guillaume A.; Meury, Anja; Riezman, Howard (2008) The presence of an ER exit signal determines the protein sorting upon ER exit in yeast. Biochem. J. 414 (2) 237-245.
  3. Watanabe, Reika; Castillon, Guillaume A.; Meury, Anja; Riezman, Howard (2008) The presence of an ER exit signal determines the protein sorting upon ER exit in yeast. Biochem. J. 414 (2) 237-245.
  4. Gonzalez-Gaitan, Marcos (2008) The Garden of Forking Paths: Recycling, Signaling, and Degradation. Dev. Cell 15 (2) 172-174.
  5. Coumailleau, Franck; González-Gaitán, Marcos (2008) From endocytosis to tumors through asymmetric cell division of stem cells. Curr. Opin. Cell Biol. 20 (4) 462-469.
  6. Bollenbach, Tobias; Pantazis, Periklis; Kicheva, Anna; Bökel, Christian; González-Gaitán, Marcos; Jülicher, Frank (2008) Precision of the Dpp gradient. Development 135 (6) 1137-1146.
  7. Kicheva, Anna; González-Gaitán, Marcos (2008) The Decapentaplegic morphogen gradient: a precise definition. Curr. Opin. Cell Biol. 20 (2) 137-143.
  8. Luyet, Pierre-Philippe; Falguières, Thomas; Pons, Véronique; Pattnaik, Asit K.; Gruenberg, Jean (2008) The ESCRT-I Subunit TSG101 Controls Endosome-to-Cytosol Release of Viral RNA. Traffic 9 (12) 2279-2290.
  9. Falguieres, Thomas; Luyet, Pierre-Philippe; Bissig, Christin; Scott, Cameron C.; Velluz, Marie-Claire; Gruenberg, Jean (2008) In Vitro Budding of Intralumenal Vesicles into Late Endosomes Is Regulated by Alix and Tsg101. Mol. Biol. Cell 19 (11) 4942-4955.
  10. Pons, Véronique; Luyet, Pierre-Philippe; Morel, Etienne; Abrami, Laurence; van der Goot, F. Gisou; Parton, Robert G; Gruenberg, Jean; Pfeffer, Suzanne (2008) Hrs and SNX3 Functions in Sorting and Membrane Invagination within Multivesicular Bodies. PLoS Biol. 9 (9) 1942-1956.
  11. Pons, Véronique; Luyet, Pierre-Philippe; Morel, Etienne; Abrami, Laurence; van der Goot, F. Gisou; Parton, Robert G; Gruenberg, Jean; Pfeffer, Suzanne (2008) Hrs and SNX3 Functions in Sorting and Membrane Invagination within Multivesicular Bodies. PLoS Biol. 9 (9) 1942-1956.
  12. Cataldo, Anne M.; Mathews, Paul M.; Boiteau, Anne Boyer; Hassinger, Linda C.; Peterhoff, Corrinne M.; Jiang, Ying; Mullaney, Kerry; Neve, Rachael L.; Gruenberg, Jean; Nixon, Ralph A. (2008) Down Syndrome Fibroblast Model of Alzheimer-Related Endosome Pathology. Am. J. Pathol. 173 (2) 370-384.
  13. Mitrovic, Sandra; Ben-Tekaya, Houchaima; Koegler, Eva; Gruenberg, Jean; Hauri, Hans-Peter (2008) The Cargo Receptors Surf4, Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)-53, and p25 Are Required to Maintain the Architecture of ERGIC and Golgi. Mol. Biol. Cell 19 (5) 1976-1990.
  14. Heng, Julian Ik-Tsen; Nguyen, Laurent; Castro, Diogo S.; Zimmer, Céline; Wildner, Hendrik; Armant, Olivier; Skowronska-Krawczyk, Dorota; Bedogni, Francesco; Matter, Jean-Marc; Hevner, Robert; Guillemot, François (2008) Neurogenin 2 controls cortical neuron migration through regulation of Rnd2. Nature 455 (7209) 114-118.
  15. Mukhopadhyay, Debdyuti; Howell, Kate S.; Riezman, Howard; Capitani, Guido (2008) Identifying Key Residues of Sphinganine-1-phosphate Lyase for Function in Vivo and in Vitro. J. Biol. Chem. 283 (29) 20159-20169.
  16. Kajiwara, Kentaro; Watanabe, Reika; Pichler, Harald; Ihara, Kensuke; Murakami, Suguru; Riezman, Howard; Funato, Kouichi (2008) Yeast ARV1 Is Required for Efficient Delivery of an Early GPI Intermediate to the First Mannosyltransferase during GPI Assembly and Controls Lipid Flow from the Endoplasmic Reticulum. Mol. Biol. Cell 19 (5) 2069-2082.
  17. Kajiwara, Kentaro; Watanabe, Reika; Pichler, Harald; Ihara, Kensuke; Murakami, Suguru; Riezman, Howard; Funato, Kouichi (2008) Yeast ARV1 Is Required for Efficient Delivery of an Early GPI Intermediate to the First Mannosyltransferase during GPI Assembly and Controls Lipid Flow from the Endoplasmic Reticulum. Mol. Biol. Cell 19 (5) 2069-2082.
  18. Idrissi, Fatima-Zahra; Grötsch, Helga; Fernández-Golbano, Isabel M.; Presciatto-Baschong, Cristina; Riezman, Howard; Geli, María-Isabel (2008) Distinct acto/myosin-I structures associate with endocytic profiles at the plasma membrane. J. Cell Biol. 180 (6) 1219-1232.
  19. Aguilera-Romero, Auxiliadora; Kaminska, Joanna; Spang, Anne; Riezman, Howard; Muñiz, Manuel (2008) The yeast p24 complex is required for the formation of COPI retrograde transport vesicles from the Golgi apparatus. J. Cell Biol. 13 (4) 5539-720.
  20. te Welscher, Yvonne M.; ten Napel, Hendrik H.; Balagué, Miriam Masià; Souza, Cleiton M.; Riezman, Howard; de Kruijff, Ben; Breukink, Eefjan (2008) Natamycin Blocks Fungal Growth by Binding Specifically to Ergosterol without Permeabilizing the Membrane. J. Biol. Chem. 283 (10) 6393-6401.
  21. Cosson, Pierre; Soldati, Thierry (2008) Eat, kill or die: when amoeba meets bacteria. Curr. Opin. Microbiol. 11 (3) 271-276.
  22. Dieckmann, Régis Gopaldass, Navin Escalera, Caroline Soldati, Thierry (2008) Maturation Changes in Purified Phagosomes. Autophagosome and Phagosome Vol. 445Ed. Deretic, VojoMethods in Molecular Biology. Humana Press. 327-337.
  23. Haruki, Hirohito; Nishikawa, Junichi; Laemmli, Ulrich K. (2008) The Anchor-Away Technique: Rapid, Conditional Establishment of Yeast Mutant Phenotypes. Mol. Cell 31 (6) 925-932.
  24. Garg, Abhishek; Di Cara, Alessandro; Xenarios, Ioannis; Mendoza, Luis; De Micheli, Giovanni (2008) Synchronous versus asynchronous modeling of gene regulatory networks. Bioinformatics 24 (17) 1917-1925.
  25. Taylor, Chris F.; Binz, Pierre-Alain; Aebersold, Ruedi; Affolter, Michel; Barkovich, Robert; Deutsch, Eric W.; Horn, David M.; Hühmer, Andreas; Kussmann, Martin; Lilley, Kathryn; Macht, Marcus; Mann, Matthias; Müller, Dieter; Neubert, Thomas A.; Nickson, Janice; Patterson, Scott D.; Raso, Roberto; Resing, Kathryn; Seymour, Sean L.; Tsugita, Akira; Xenarios, Ioannis; Zeng, Rong; Julian, Randall K. (2008) Correspondence: Guidelines for reporting the use of mass spectrometry in proteomics. Nat. Biotechnol. 26 (8) 860-861.
  26. Moretti, Sébastien; Wilm, Andreas; Higgins, Desmond G.; Xenarios, Ioannis; Notredame, Cédric (2008) R-Coffee: a web server for accurately aligning noncoding RNA sequences. Nucleic Acids Res. 36 (suppl 2) W10-W13.
  27. Favre-Kontula, Linda; Sattonnet-Roche, Pascale; Magnenat, Edith; Proudfoot, Amanda E. I.; Boschert, Ursula; Xenarios, Ioannis; Vilbois, Francis; Antonsson, Bruno (2008) Detection and identification of plasma proteins that bind GlialCAM using ProteinChip™ Arrays, SELDI-TOF MS, and nano-LC MS/MS. Proteomics 8 (2) 378-388.
  28. Rougemont, Jacques; Amzallag, Arnaud; Iseli, Christian; Farinelli, Laurent; Xenarios, Ioannis; Naef, Felix (2008) Probabilistic base calling of Solexa sequencing data. BMC Bioinf. 9 (1) 431.
  29. Kundzewicz, Adam Munier, Francis Matter, Jean-Marc (2008) Expression and Cell Compartmentalization of EFEMP1, a Protein Associated with Malattia Leventinese. Recent Advances in Retinal Degeneration Vol. 613 (Part VI)Ed. Anderson, Robert E. LaVail, Matthew M. Hollyfield, Joe G.Advances in Experimental Medicine and Biology. Springer. (New York). 277-282.
  30. Frost, Adam; Perera, Rushika; Roux, Aurélien; Spasov, Krasimir; Destaing, Olivier; Egelman, Edward H.; De Camilli, Pietro; Unger, Vinzenz M. (2008) Structural Basis of Membrane Invagination by F-BAR Domains. Cell 132 (5) 807-817.
  31. Krauss, Michael; Jia, Jun-Yong; Roux, Aurélien; Beck, Rainer; Wieland, Felix T.; De Camilli, Pietro; Haucke, Volker (2008) Arf1-GTP-induced Tubule Formation Suggests a Function of Arf Family Proteins in Curvature Acquisition at Sites of Vesicle Budding. J. Biol. Chem. 283 (41) 27717-27723.
  32. Roux, Aurélien; Antonny, Bruno (2008) The Long and Short of Membrane Fission. Cell 135 (7) 1163-1165.
  33. Van Eyk, Jennifer E. Dunn, Michael J. Vaezzadeh, Ali R. Zimmermann-Ivol, Catherine G. Deshusses, Jacques Scherl, Alexander Hochstrasser, Denis F. (2008) IEF Analysis of Peptides for Biomarkers Discovery. Clinical Proteomics: From Diagnosis to Therapy (Chapter 5)Ed. Van Eyk, Jennifer E. Dunn, Michael J.Wiley-VCH Verlag GmbH & Co. KGaA. (Weinheim, Germany). 61-71.