Publications

2009

  1. Morel, Etienne; Parton, Robert G.; Gruenberg, Jean (2009) Annexin A2-Dependent Polymerization of Actin Mediates Endosome Biogenesis. Dev. Cell 16 (3) 445-457.
  2. Castillon, Guillaume A.; Watanabe, Reika; Taylor, Marcia; Schwabe, Tatjana M. E.; Riezman, Howard (2009) Concentration of GPI-Anchored Proteins upon ER Exit in Yeast. Traffic 10 (2) 186-200.
  3. Castillon, Guillaume A.; Watanabe, Reika; Taylor, Marcia; Schwabe, Tatjana M. E.; Riezman, Howard (2009) Concentration of GPI-Anchored Proteins upon ER Exit in Yeast. Traffic 10 (2) 186-200.
  4. Guan, Xue Li; Souza, Cleiton M.; Pichler, Harald; Dewhurst, Gisèle; Schaad, Olivier; Kajiwara, Kentaro; Wakabayashi, Hirotomo; Ivanova, Tania; Castillon, Guillaume A.; Piccolis, Manuele; Abe, Fumiyoshi; Loewith, Robbie; Funato, Kouichi; Wenk, Markus R.; Riezman, Howard (2009) Functional Interactions between Sphingolipids and Sterols in Biological Membranes Regulating Cell Physiology. Mol. Biol. Cell 20 (7) 2083-2095.
  5. Guan, Xue Li; Souza, Cleiton M.; Pichler, Harald; Dewhurst, Gisèle; Schaad, Olivier; Kajiwara, Kentaro; Wakabayashi, Hirotomo; Ivanova, Tania; Castillon, Guillaume A.; Piccolis, Manuele; Abe, Fumiyoshi; Loewith, Robbie; Funato, Kouichi; Wenk, Markus R.; Riezman, Howard (2009) Functional Interactions between Sphingolipids and Sterols in Biological Membranes Regulating Cell Physiology. Mol. Biol. Cell 20 (7) 2083-2095.
  6. Menuz, Vincent; Howell, Kate S.; Gentina, Sébastien; Epstein, Sharon; Riezman, Isabelle; Fornallaz-Mulhauser, Monique; Hengartner, Michael O.; Gomez, Marie; Riezman, Howard; Martinou, Jean-Claude (2009) Protection of C. elegans from Anoxia by HYL-2 Ceramide Synthase. Science 324 (5925) 381-384.
  7. Hagedorn, Monica; Rohde, Kyle H.; Russell, David G.; Soldati, Thierry (2009) Infection by Tubercular Mycobacteria Is Spread by Nonlytic Ejection from Their Amoeba Hosts. Science 323 (5922) 1729-1733.
  8. Dieckmann, Régis Soldati, Thierry (2009) Phagosome Proteomes Unite! A Virtual Model of Maturation as a Tool to Study Pathogen-Induced Changes. Intracellular Niches of Microbes: A Pathogens Guide Through the Host Cell (Chapter 7)Ed. Schaible, Ulrich E. Haas, AlbertWiley-VCH. (Weinheim). 107-124.
  9. Hagedorn, Monica Soldati, Thierry (2009) Mycobacterium Marinum. Intracellular Niches of Microbes: A Pathogens Guide Through the Host Cell (Chapter 25)Ed. Schaible, Ulrich E. Haas, AlbertWiley-VCH. (Weinheim). 455-467.
  10. González-Gaitán, Marcos; Gruenberg, Jean; Halazonetis, Thanos; Laemmli, Ulrich K.; Matter, Jean-Marc; Riezman, Howard; Schaad, Olivier; Soldati, Thierry; Watanabe, Reika (2009) The Biochemistry Department of the University of Geneva: Understanding the Molecular Basis and Function of Intracellular Organization. CHIMIA 63 (12) 830-834.
  11. González-Gaitán, Marcos; Gruenberg, Jean; Halazonetis, Thanos; Laemmli, Ulrich K.; Matter, Jean-Marc; Riezman, Howard; Schaad, Olivier; Soldati, Thierry; Watanabe, Reika (2009) The Biochemistry Department of the University of Geneva: Understanding the Molecular Basis and Function of Intracellular Organization. CHIMIA 63 (12) 830-834.
  12. González-Gaitán, Marcos; Gruenberg, Jean; Halazonetis, Thanos; Laemmli, Ulrich K.; Matter, Jean-Marc; Riezman, Howard; Schaad, Olivier; Soldati, Thierry; Watanabe, Reika (2009) The Biochemistry Department of the University of Geneva: Understanding the Molecular Basis and Function of Intracellular Organization. CHIMIA 63 (12) 830-834.
  13. González-Gaitán, Marcos; Gruenberg, Jean; Halazonetis, Thanos; Laemmli, Ulrich K.; Matter, Jean-Marc; Riezman, Howard; Schaad, Olivier; Soldati, Thierry; Watanabe, Reika (2009) The Biochemistry Department of the University of Geneva: Understanding the Molecular Basis and Function of Intracellular Organization. CHIMIA 63 (12) 830-834.
  14. González-Gaitán, Marcos; Gruenberg, Jean; Halazonetis, Thanos; Laemmli, Ulrich K.; Matter, Jean-Marc; Riezman, Howard; Schaad, Olivier; Soldati, Thierry; Watanabe, Reika (2009) The Biochemistry Department of the University of Geneva: Understanding the Molecular Basis and Function of Intracellular Organization. CHIMIA 63 (12) 830-834.
  15. González-Gaitán, Marcos; Gruenberg, Jean; Halazonetis, Thanos; Laemmli, Ulrich K.; Matter, Jean-Marc; Riezman, Howard; Schaad, Olivier; Soldati, Thierry; Watanabe, Reika (2009) The Biochemistry Department of the University of Geneva: Understanding the Molecular Basis and Function of Intracellular Organization. CHIMIA 63 (12) 830-834.
  16. González-Gaitán, Marcos; Gruenberg, Jean; Halazonetis, Thanos; Laemmli, Ulrich K.; Matter, Jean-Marc; Riezman, Howard; Schaad, Olivier; Soldati, Thierry; Watanabe, Reika (2009) The Biochemistry Department of the University of Geneva: Understanding the Molecular Basis and Function of Intracellular Organization. CHIMIA 63 (12) 830-834.
  17. González-Gaitán, Marcos; Gruenberg, Jean; Halazonetis, Thanos; Laemmli, Ulrich K.; Matter, Jean-Marc; Riezman, Howard; Schaad, Olivier; Soldati, Thierry; Watanabe, Reika (2009) The Biochemistry Department of the University of Geneva: Understanding the Molecular Basis and Function of Intracellular Organization. CHIMIA 63 (12) 830-834.
  18. Le Martelot, Gwendal; Claudel, Thierry; Gatfield, David; Schaad, Olivier; Kornmann, Benoît; Sasso, Giuseppe Lo; Moschetta, Antonio; Schibler, Ueli; Vidal-Puig, Antonio J. (2009) REV-ERBα Participates in Circadian SREBP Signaling and Bile Acid Homeostasis. PLoS Biol. 7 (9) e1000181.
  19. Skowronska-Krawczyk, Dorota; Chiodini, Florence; Ebeling, Martin; Alliod, Christine; Kundzewicz, Adam; Castro, Diogo; Ballivet, Marc; Guillemot, François; Matter-Sadzinski, Lidia; Matter, Jean-Marc (2009) Conserved regulatory sequences in Atoh7 mediate non-conserved regulatory responses in retina ontogenesis. Development 136 (22) 3767-3777.
  20. Skowronska-Krawczyk, Dorota; Chiodini, Florence; Ebeling, Martin; Alliod, Christine; Kundzewicz, Adam; Castro, Diogo; Ballivet, Marc; Guillemot, François; Matter-Sadzinski, Lidia; Matter, Jean-Marc (2009) Conserved regulatory sequences in Atoh7 mediate non-conserved regulatory responses in retina ontogenesis. Development 136 (22) 3767-3777.
  21. Wartlick, Ortrud; Kicheva, Anna; Gonzalez-Gaitan, Marcos (2009) Morphogen Gradient Formation. Cold Spring Harbor Perspect. Biol. 1 (3) a001255-a001255.
  22. Fürthauer, Maximilian; González-Gaitán, Marcos (2009) Endocytosis and mitosis: A two-way relationship. Cell Cycle 8 (20) 3311-3318.
  23. Fürthauer, Maximilian; González-Gaitán, Marcos (2009) Endocytosis, asymmetric cell division, stem cells and cancer: Unus pro omnibus, omnes pro uno. Mol. Oncol. 3 (4) 339-353.
  24. Bittig, T.; Wartlick, Ortrud; González-Gaitán, Marcos; Jülicher, Frank (2009) Quantification of growth asymmetries in developing epithelia. Eur. Phys. J. E 30 (1) 93-99.
  25. Oates, Andrew C.; Gorfinkiel, Nicole; González-Gaitán, Marcos; Heisenberg, Carl-Philipp (2009) Quantitative approaches in developmental biology. Nat. Rev. Genet. 10 (8) 517-530.
  26. Fürthauer, Maximilian; González-Gaitán, Marcos (2009) Endocytic Regulation of Notch Signalling During Development. Traffic 10 (7) 792-802.
  27. Fürthauer, Maximilian; González-Gaitán, Marcos (2009) Tales of 1001 Functions: The Multiple Roles of Membrane Trafficking in Development. Traffic 10 (7) 781-782.
  28. Coumailleau, Franck; Fürthauer, Maximilian; Knoblich, J. A.; González-Gaitán, Marcos (2009) Directional Delta and Notch trafficking in Sara endosomes during asymmetric cell division. Nature 458 (7241) 1051-1055.
  29. Peralta, Susana; Gómez, Yolanda; González-Gaitán, Marcos A.; Moya, Fernando; Vinós, Javier (2009) Notch down-regulation by endocytosis is essential for pigment cell determination and survival in the Drosophila retina. Mech. Dev. 126 (3-4) 256-269.
  30. Gruenberg, Jean (2009) Viruses and endosome membrane dynamics. Curr. Opin. Cell Biol. 21 (4) 582-588.
  31. Falguières, Thomas; Luyet, Pierre-Philippe; Gruenberg, Jean (2009) Molecular assemblies and membrane domains in multivesicular endosome dynamics. Exp. Cell Res. 315 (9) 1567-1573.
  32. Morel, Etienne; Gruenberg, Jean (2009) Annexin A2 Binding to Endosomes and Functions in Endosomal Transport Are Regulated by Tyrosine 23 Phosphorylation. J. Biol. Chem. 284 (3) 1604-1611.
  33. Castillon, Guillaume A. Riezman, Howard (2009) Transport of GPI-Anchored Proteins: Connections to Sphingolipid and Sterol Transport. Glycosylphosphatidylinositol (GPI) Anchoring of Proteins Vol. 26 (Chapter 13)Ed. Menon, Anant Kumar Kinoshita, Taroh Orlean, Peter Tamanoi, FuyuhikoThe Enzymes. Elsevier. 269-288.
  34. Deshusses, Jacques; Riezman, Howard (2009) History of Biochemistry at the University of Geneva: From the Boulevard des Philosophes to Quai Ernest-Ansermet. CHIMIA 63 (12) 826-829.
  35. Deshusses, Jacques; Riezman, Howard (2009) History of Biochemistry at the University of Geneva: From the Boulevard des Philosophes to Quai Ernest-Ansermet. CHIMIA 63 (12) 826-829.
  36. Hannich, J. Thomas; Entchev, Eugeni V.; Mende, Fanny; Boytchev, Hristio; Martin, René; Zagoriy, Vyacheslav; Theumer, Gabriele; Riezman, Isabelle; Riezman, Howard; Knölker, Hans-Joachim; Kurzchalia, Teymuras V. (2009) Methylation of the Sterol Nucleus by STRM-1 Regulates Dauer Larva Formation in Caenorhabditis elegans. Dev. Cell 16 (6) 833-843.
  37. Gatfield, David; Le Martelot, Gwendal; Vejnar, Charles E.; Gerlach, Daniel; Schaad, Olivier; Fleury-Olela, Fabienne; Ruskeepää, Anna-Liisa; Oresic, Matej; Esau, Christine C.; Zdobnov, Evgeny M.; Schibler, Ueli (2009) Integration of microRNA miR-122 in hepatic circadian gene expression. Development 23 (11) 1313-1326.
  38. Papaioannou, Marilena D.; Pitetti, Jean-Luc; Ro, Seungil; Park, Chanjae; Aubry, Florence; Schaad, Olivier; Vejnar, Charles E.; Kühne, Francoise; Descombes, Patrick; Zdobnov, Evgeny M.; McManus, Michael T.; Guillou, Florian; Harfe, Brian D.; Yan, Wei; Jégou, Bernard; Nef, Serge (2009) Sertoli cell Dicer is essential for spermatogenesis in mice. Dev. Biol. 326 (1) 250-259.
  39. Ramirez, Jean-Marie; Schaad, Olivier; Durual, Stephane; Cossali, Dominique; Docquier, Mylène; Beris, Photis; Descombes, Patrick; Matthes, Thomas (2009) Growth differentiation factor 15 production is necessary for normal erythroid differentiation and is increased in refractory anaemia with ring-sideroblasts. Br. J. Haematol. 144 (2) 251-262.
  40. Gattiker, Alexandre; Hermida, Leandro; Liechti, Robin; Xenarios, Ioannis; Collin, Olivier; Rougemont, Jacques; Primig, Michael (2009) MIMAS 3.0 is a Multiomics Information Management and Annotation System. BMC Bioinf. 10 (1) 151.
  41. Gattiker, Alexandre; Dessimoz, Christophe; Schneider, Adrian; Xenarios, Ioannis; Pagni, Marco; Rougemont, Jacques (2009) The Microbe browser for comparative genomics. Nucleic Acids Res. 37 (suppl 2) W296-W299.
  42. Kahlem, Pascal; Clegg, Andrew; Reisinger, Florian; Xenarios, Ioannis; Hermjakob, Henning; Orengo, Christine; Birney, Ewan (2009) ENFIN – A European network for integrative systems biology. C. R. Biol. 332 (11) 1050-1058.
  43. Bugliani, Marco; Masini, Matilde; Liechti, Robin; Marselli, Lorella; Xenarios, Ioannis; Boggi, Ugo; Filipponi, Franco; Masiello, Pellegrino; Marchetti, Piero (2009) The direct effects of tacrolimus and cyclosporin A on isolated human islets: A functional, survival and gene expression study. Islets 1 (2) 106-110.
  44. Martin, Olivier; Valsesia, Armand; Telenti, Amalio; Xenarios, Ioannis; Stevenson, Brian J. (2009) AssociationViewer: a scalable and integrated software tool for visualization of large-scale variation data in genomic context. Bioinformatics 25 (5) 662-663.
  45. Garg, Abhishek; Mohanram, Kartik; Di Cara, Alessandro; De Micheli, Giovanni; Xenarios, Ioannis (2009) Modeling stochasticity and robustness in gene regulatory networks. Bioinformatics 25 (12) i101-i109.
  46. Ortiz, Millan; Guex, Nicolas; Patin, Etienne; Martin, Olivier; Xenarios, Ioannis; Ciuffi, Angela; Quintana-Murci, Lluis; Telenti, Amalio (2009) Evolutionary Trajectories of Primate Genes Involved in HIV Pathogenesis. Mol. Biol. Evol. 26 (12) 2865-2875.
  47. Lenz, Martin; Morlot, Sandrine; Roux, Aurélien (2009) Mechanical requirements for membrane fission: Common facts from various examples. FEBS Lett. 583 (23) 3839-3846.